Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0833 ATGTTGGATCTCAATGTCGACGTGGAAGGTTCTCAGCCCCAAATGGAAGAGGACTCAGGGACTTCCAACTCCTCGGTGCTGAATTTCGAGGAATCTCGAGACGAAAATTCTTCCGCCTTCGTTTTCGACATACTGAAGAGAGAATCAGATTGTCGGGTTGAGGATGATGAAGAGAAGAAAACTCCACAAATCACGACAAAGCCACTTTTCCCTGTGAACAGTGACGATAAGGGACGCAGAGATTGTGATTTCCGATTGGGATTATCGTGTCCGAGAAGTAATCAATGGCTGAACCTGTCCTTCGCTGAGAGTGGTGCCGGCACGCAAGATGAATTGAGAGTGTTGCAGCAAAAGCAACCCCAAATCAGGAAAAGCAGAAGAGGGCCCAGGTCTCGAAGCTCACAGTACAGGGGTGTTACTTTCTACCGCAGGACTGGTCGATGGGAATCCCATATATGGGATTGTGGGAAGCAGGTCTATTTAGGTGGATTTGACACTGCACACACTGCAGCAAGAGCATACGATAGGGCTGCAATTAAGTTCAGAGGAGTTGATGCTGATATAAACTTCAGTCTGAGTGATTATGAGGAAGACATGAAGATGATGAAAGGTTTGAGTAAAGAGGAGTTTGTCCAAGTCCTTCGCCGCCAATGCTCCGGTATCCCAAGAGGGAGCTCAAAATATAGAGTTCTGTCTCTCAACAAATGGGGTCAATGGGAAGCACAAGCCAGCCCTTTCCTTGGCAAGAAGATTTATGACAAACTACCCTTCAAGAGTGATGGAAGAGGATCGGTGACTAGCTTTGAGCCTAGTAAGGGAGAGAGAACTATTGAGTCCAGCAGAGGAGGGAACCAACAAAATCTTGATTTGAGCCTTGGAATTTCTCCACCTTCTAATGAATCCAAGAAGAATGATCCTGGGGGAAACTTATCTTTTTGTTATACAGCTTGCGAGCTGCCCAACAAAGGAGGGCTGATGGCTGATACCAGTGGTGCTGCAATAATAGGGGGACAAGCCATTTATGGTGTGGCAATGCCATCTAAACATGGCCAAAAGTGGTGCTCTGGCTTATATCCTGGCCATGTACAGGATTATGAGTGTATCAATGCCAGGACAAGGCCATAG 1125 0.4676 MLDLNVDVEGSQPQMEEDSGTSNSSVLNFEESRDENSSAFVFDILKRESDCRVEDDEEKKTPQITTKPLFPVNSDDKGRRDCDFRLGLSCPRSNQWLNLSFAESGAGTQDELRVLQQKQPQIRKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHTAARAYDRAAIKFRGVDADINFSLSDYEEDMKMMKGLSKEEFVQVLRRQCSGIPRGSSKYRVLSLNKWGQWEAQASPFLGKKIYDKLPFKSDGRGSVTSFEPSKGERTIESSRGGNQQNLDLSLGISPPSNESKKNDPGGNLSFCYTACELPNKGGLMADTSGAAIIGGQAIYGVAMPSKHGQKWCSGLYPGHVQDYECINARTRP 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0833 374 Pfam AP2 domain 135 183 IPR001471 GO:0003700|GO:0006355
Prci1g0833 374 MobiDBLite consensus disorder prediction 53 72 - -
Prci1g0833 374 FunFam AP2-like ethylene-responsive transcription factor 134 193 - -
Prci1g0833 374 MobiDBLite consensus disorder prediction 12 35 - -
Prci1g0833 374 ProSiteProfiles AP2/ERF domain profile. 135 191 IPR001471 GO:0003700|GO:0006355
Prci1g0833 374 SMART rav1_2 135 197 IPR001471 GO:0003700|GO:0006355
Prci1g0833 374 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 104 286 - -
Prci1g0833 374 CDD AP2 135 190 IPR001471 GO:0003700|GO:0006355
Prci1g0833 374 MobiDBLite consensus disorder prediction 261 288 - -
Prci1g0833 374 Gene3D AP2/ERF domain 134 193 IPR036955 GO:0003700|GO:0006355
Prci1g0833 374 MobiDBLite consensus disorder prediction 264 288 - -
Prci1g0833 374 SUPERFAMILY DNA-binding domain 134 192 IPR016177 GO:0003677
Prci1g0833 374 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0833 Prci-Chr1 9231421 9235421 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0833 17 250 AP2-EREBP Transcription Factor Family AT2G28550 59.583 1.27e-65 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Prci1g0833 AP2 5e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0833 K09284 - qsu:112017577 357.836