Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0830 ATGTTGGATCTCAATGTCGACGTGGAAGGTTCTCAGCCCCAAATGGAAGAGGACTCAGGGACTTCCAACTCCTCGGTGCTGAATTTCGAGGAATCTCGAGACGAAAATTCTTCCGCCTTCGTTTTCGACATACTGAAGAGAGAATCAGATTGTCGGGTTGAGGATGATGAAGAGAAGAAAACTCCACAAATCACGACAAAGCCACTTTTCCCTGTGAACAGTGACGATAAGGGACGCAGAGATTGTGATTTCCGATTGGGATTATCGTGTCCGAGAAGTAATCAATGGCTGAACCTGTCCTTCGCTGAGAGTGGTGCCGGCACGCAAGATGAATTGAGAGTGTTGCAGCAAAAGCAACCCCAAATCAGGAAAAGCAGAAGAGGGCCCAGGTCTCGAAGCTCACAGTACAGGGGTGTTACTTTCTACCGCAGGACTGGTCGATGGGAATCCCATATATGGGATTGTGGGAAGCAGGTCTATTTAGGTGGATTTGACACTGCACACACTGCAGCAAGAGCATACGATAGGGCTGCAATTAAGTTCAGAGGAGTTGATGCTGATATAAACTTCAGTCTGAGTGATTATGAGGAAGACATGAAGATGATGAAAGGTTTGAGTAAAGAGGAGTTTGTCCAAGTCCTTCGCCGCCAATGCTCCGGTATCCCAAGAGGGAGCTCAAAATATAGAGTTCTGTCTCTCAACAAATGGGGTCAATGGGAAGCACAAGCCAGCCCTTTCCTTGGCAAGAAGATTTATGACAAACTACCCTTCAAGAGTGATGGAAGAGGATCGGTGACTAGCTTTGAGCCTAGTAAGGGAGAGAGAACTATTGAGTCCAGCAGAGGAGGGAACCAACAAAATCTTGATTTGAGCCTTGGAATTTCTCCACCTTCTAATGAATCCAAGAAGAATGATCCTGGGGGAAACTTATCTTTTTGTTATACAGCTTGCGAGCTGCCCAACAAAGGAGGGCTGATGCCCCTTTTACAGGCTGATACCAGTGGTGCTGCAATAATAGGGGGACAAGCCATTTATGGTGTGGCAATGCCATCTAAACATGGCCAAAAGTGGTGCTCTGGCTTATATCCTGGCCATGTACAGGATTATGAGGACAAGGCCATAGAAAAGAGAACAGAAGTTGTTCCCTTATCAAGATTCCCAAATTTGGCTTGGCAACTTAATAGCAACGGCAGCATCACGCCGGTGCCGGTGTTTTCTAATGCAGCATCATCAAAATTCATTTCTTCTAGCAACAATGGTGTGTCAGCCCCACCTGCAATCAACCCTCGTAACAATTCTATCTACAATCTGTGCTTCAGTTCAACCACAACATCCACAATTAATAGCTCCCCAAGTTGCCAAAGTCTGAGTACCTGA 1377 0.4619 MLDLNVDVEGSQPQMEEDSGTSNSSVLNFEESRDENSSAFVFDILKRESDCRVEDDEEKKTPQITTKPLFPVNSDDKGRRDCDFRLGLSCPRSNQWLNLSFAESGAGTQDELRVLQQKQPQIRKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHTAARAYDRAAIKFRGVDADINFSLSDYEEDMKMMKGLSKEEFVQVLRRQCSGIPRGSSKYRVLSLNKWGQWEAQASPFLGKKIYDKLPFKSDGRGSVTSFEPSKGERTIESSRGGNQQNLDLSLGISPPSNESKKNDPGGNLSFCYTACELPNKGGLMPLLQADTSGAAIIGGQAIYGVAMPSKHGQKWCSGLYPGHVQDYEDKAIEKRTEVVPLSRFPNLAWQLNSNGSITPVPVFSNAASSKFISSSNNGVSAPPAINPRNNSIYNLCFSSTTTSTINSSPSCQSLST 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0830 458 MobiDBLite consensus disorder prediction 261 306 - -
Prci1g0830 458 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 104 287 - -
Prci1g0830 458 MobiDBLite consensus disorder prediction 264 306 - -
Prci1g0830 458 MobiDBLite consensus disorder prediction 53 72 - -
Prci1g0830 458 MobiDBLite consensus disorder prediction 12 35 - -
Prci1g0830 458 ProSiteProfiles AP2/ERF domain profile. 135 191 IPR001471 GO:0003700|GO:0006355
Prci1g0830 458 SMART rav1_2 135 197 IPR001471 GO:0003700|GO:0006355
Prci1g0830 458 FunFam AP2-like ethylene-responsive transcription factor 134 193 - -
Prci1g0830 458 CDD AP2 135 190 IPR001471 GO:0003700|GO:0006355
Prci1g0830 458 Gene3D AP2/ERF domain 134 193 IPR036955 GO:0003700|GO:0006355
Prci1g0830 458 SUPERFAMILY DNA-binding domain 134 192 IPR016177 GO:0003677
Prci1g0830 458 MobiDBLite consensus disorder prediction 1 35 - -
Prci1g0830 458 Pfam AP2 domain 135 183 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0830 Prci-Chr1 9231018 9235423 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0830 17 250 AP2-EREBP Transcription Factor Family AT2G28550 59.583 3.78e-65 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Prci1g0830 AP2 6.6e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0830 K09284 - qsu:112017577 400.593