Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0803 ATGCCTTTACACATTTCTTCATCGTCTTTCAGATATATATATATATATATATATATCTCAAACCATCATCATCAATTGTCACATGAAAGAAAAAACGATATGGCAGCAAAAGCAACAAGCAGCTCCACCATTATTATTGTGGCTGCTTTCATTGCAGCTCTCATCACAGGCACCAACATCACCACTGTCGTCTCCGACGACACCGCTCCAGTTCCCGGCGACAAGTCCCAGCTGAACAAATGGTTCAAGGAGAACGTGAAGCCATTATCGACACAGTTACGACGACGAAGGACGATGATTCAACCTTCAGTTGCAGAAGCAGAGAAACGTGTGAGGATGGTGAAGGTGAAGAAAGATGGAAGTGGGGACTTCAAGACGGTGACGGCGGCCATTAACAGCATCCCGGAAGGTAACTGGAGACGAGTGATTGTGTTTATCGGAAGCGGGACGTACTTTGAGAAGATAAAGATAGAGAAGACGAAGCCTTTTGTGACTCTTTATGGTGATCCTCAGAAATGGCCAAACTTGACTTTCAATGGAACTGCACAACGATTTGGAACCGTAGATAGTGCTTCGTTGATTGTTGAATCTGACTACTTCGTTGCTGTCAATCTCATTATTTCGAACTCAGCACCGATGCCGAACGGGAAGATTGCGAGGCCGCAGGCGGTGGCGTTGAGGATTTCCGGCAACTATGCTGCGTTCTACAGATGCGCAATGTTAGGATATCAGGACACCATTTGTGACGACAGAGGCAAGCATTTGTTCAAAGATTGCTACATTCAGGGAACCATGGATTTCATTTTTGGAAGTGGCAAATCTCTTTATCTGAACGCAAGACTGAACGTGGTGGGGAGAAACGGAGGGGTGATAGCAGCGCCAGCAAGGACTAATCAATCGGACGACACGTGTGGGTATTCGTTTGTGCATTGCGACATAAGCGGAACAGCCAATGGCACGTACTTGGGGAGAGCGTGGATGTCACATCCCAAGGTGGTCTACGCTTACACTTCCATGAGCTCAATTGTGAACCCTCTCGGCTGGGACGATAGCCCTCAAGGAGCTCCCAACACTGTGTATTATGGAGAGTACAAGAACAAAGGAGTAGGTGCGAGGAGGACAGGACGTGCAAATTTCACAAAGTGGCTTAGACGTTCAGAGGCTTTACCATTCATCACTCTCAGCTACATTGAGGCTTCCAAGTGGTTGCTTCCTCCCCCAACACTTCCTTAG 1233 0.4712 MPLHISSSSFRYIYIYIYISNHHHQLSHERKNDMAAKATSSSTIIIVAAFIAALITGTNITTVVSDDTAPVPGDKSQLNKWFKENVKPLSTQLRRRRTMIQPSVAEAEKRVRMVKVKKDGSGDFKTVTAAINSIPEGNWRRVIVFIGSGTYFEKIKIEKTKPFVTLYGDPQKWPNLTFNGTAQRFGTVDSASLIVESDYFVAVNLIISNSAPMPNGKIARPQAVALRISGNYAAFYRCAMLGYQDTICDDRGKHLFKDCYIQGTMDFIFGSGKSLYLNARLNVVGRNGGVIAAPARTNQSDDTCGYSFVHCDISGTANGTYLGRAWMSHPKVVYAYTSMSSIVNPLGWDDSPQGAPNTVYYGEYKNKGVGARRTGRANFTKWLRRSEALPFITLSYIEASKWLLPPPTLP 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0803 410 Pfam Pectinesterase 114 398 IPR000070 GO:0030599|GO:0042545
Prci1g0803 410 Gene3D - 109 405 IPR012334 -
Prci1g0803 410 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 108 403 - -
Prci1g0803 410 FunFam Pectinesterase 109 405 - -
Prci1g0803 410 SUPERFAMILY Pectin lyase-like 113 404 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0803 Prci-Chr1 8984079 8987594 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0803 63 409 Carbohydrate Esterase AT1G69940 52.586 1.21e-132 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0803 K01051 - gmx:100786427 434.106