Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0802 ATGACGGTGGCCACCAAAATAAGTCGTGTTTCTTCAATTCAGGTGGCCGTGGTGGCGGTCATCGTCGCCGCCACGGCGGTGTTATCCGACGACAATGTGCCGATCCCGTCAGACAAAGATCAATTGGACCAATGGTTCTCACAGAACGTGCAGCCATTATCTGCCCGGAAGGGAACTCTGGACCCAGACCTGGTGGCCGCAGAAGCTTCTCCGAAGGTTGTTAAGGTTTCACAAGACGGAAGCGGCGACTTCAAGACGATCACCGACGCGATTAACAGCGTTCCGGTGAATAACGCGAAGCGAGTGATCATCAAAATCGCCGGTGGAGTTTATACAGAGAAGGTCACGATTGATAGGACGAAGGATTTCATCACTCTCCTTGGTGATCCAAAAAACATGCCTAACTTGACCTATGGTGGCACCGCCAAACAATACGGCACGGTTGATAGTGCTACACTCATTACCAACGGAAATTACTTCGTCGCTGCAAATATTATTTTCTCGAATTCGGCGCCGATACCGGACGGGCGAAGGGAGGGAGCTCAGCCGGTGGCGATCCGTGTGTCCGGCGACAAGTCCGCCTTCTACAACTGCGTGTTATTAGGGTTTCAAGACACGCTATGTGATGACAGAGGAAACCATTTGTTTAAGGACTGTACAATCCAAGGCACAGTTGATTTCATATTTGGGAGCGGCAAGTCGCTGTATCTGAACACAAAGCTGGTGGTGGTGGGGAACGTCGGCGGCGTGATCGCAGCTCAGGCGAGAGAGAGCGACGACGACACCATAGGGTACTCGTTTGTTCACTGTGACATAAGTGGGAGTGCCAATGGGACGTTCTTGGGAAGAGCATGGATGTCTCATGGCAGAGTTGTGTATGCTTATACTTCCATGAGTGACATTATTACTCCTCTTGGTTGGAACATCAACAACCATCCTTCTATGGCTCAGACGGTATATTTTGGAGAGTATCAGAACAGCGGAGATGGTGCAAATACCAAAGGACGTGCCCCCTTCACAAAGTTCCTTAGTGATGCTGATGCCAAGGAATTCCTTTCTCTTGGCTTCATTCAAGCTTCTGAGTGGCTGCTTCCTCCTCCTCAAGCCTAA 1110 0.5045 MTVATKISRVSSIQVAVVAVIVAATAVLSDDNVPIPSDKDQLDQWFSQNVQPLSARKGTLDPDLVAAEASPKVVKVSQDGSGDFKTITDAINSVPVNNAKRVIIKIAGGVYTEKVTIDRTKDFITLLGDPKNMPNLTYGGTAKQYGTVDSATLITNGNYFVAANIIFSNSAPIPDGRREGAQPVAIRVSGDKSAFYNCVLLGFQDTLCDDRGNHLFKDCTIQGTVDFIFGSGKSLYLNTKLVVVGNVGGVIAAQARESDDDTIGYSFVHCDISGSANGTFLGRAWMSHGRVVYAYTSMSDIITPLGWNINNHPSMAQTVYFGEYQNSGDGANTKGRAPFTKFLSDADAKEFLSLGFIQASEWLLPPPQA 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0802 369 Pfam Pectinesterase 74 359 IPR000070 GO:0030599|GO:0042545
Prci1g0802 369 FunFam Pectinesterase 69 365 - -
Prci1g0802 369 Gene3D - 72 366 IPR012334 -
Prci1g0802 369 ProSitePatterns Pectinesterase signature 2. 221 230 IPR033131 -
Prci1g0802 369 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 66 363 - -
Prci1g0802 369 SUPERFAMILY Pectin lyase-like 68 363 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0802 Prci-Chr1 8977373 8981031 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0802 12 367 Carbohydrate Esterase AT1G69940 56.742 1.60e-149 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0802 K01051 - egr:104426935 464.922