Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0789 ATGGTTCTTCTTCACTCAAAGGTGGATGAAGCGACTAGAGAGCAGCGGGTTAACGCACATCGTTCCAAGCATTCAGAAACTGAGCAGCGAAGGAGGAGCAAGATAAATGAAAGATTTCAGATCCTGAGAGATCTCATTCCTCAAAATGATCAGAAAAGGGATAAGGCTTCTTTCTTGCTGGAGGTTATTGAGTATATTCAATTTTTACAGGAGAAATTACAAATGTATGAGCAATCTTACCAAGGGTGGAATCAGGAGCCCATGAAATTAATTCCCTGGAGAAATCATCGTGGACCTACAGAAAATGTCACATCTCAGGCTATGCAAAATGGTTCTGGTCATGAGAACAATGATCTCTCTCCATCGCTGCCCTTAAATGCACAGAATGCAATTGAATCTGACTTGTCACCGACAATTATTCAGAAGGCTGCCCCCCCTGGTTTAGCTTCTGAAGCAGTTCCCTTGGGTATGCAAATGCGGTTGGACATGTTTGATGCGGCTGTGAGCAGTGGCATTCCAACCCAGCATTTTCATGAAGCAATATCTAACTCTGAGAACACGCCTTCCCATACTCAGCCTCAGGTGTGTCTTGGGGGACCTGAGGAGGGTGCATATGATTTTCCAAATAATACATTGAAGGAACAGGATGAGCTAGCATTTGAAAGTGAGTCAGTTAGCATCTCAAGAGCCTATTCTCAAGGAATATTGGATACTTTTGTGCACGCACTGCGGTCTTCAGGTGTGGATTTATCTGAGGCCAACGTTTCAGTACAAATTGATCTAGGGAGACGATCAATTGCCTCCACATCTAGCTCAAAGGATCATGAGAACCAATTTGTGAACAATCCGGCAGTGCCATGTTCAGGAGTTGACTACTGCAGTGAGGATTCTGAACAAGCTCTTAAGAGGCTCAGAACTGAAGCGAGTTAG 930 0.4419 MVLLHSKVDEATREQRVNAHRSKHSETEQRRRSKINERFQILRDLIPQNDQKRDKASFLLEVIEYIQFLQEKLQMYEQSYQGWNQEPMKLIPWRNHRGPTENVTSQAMQNGSGHENNDLSPSLPLNAQNAIESDLSPTIIQKAAPPGLASEAVPLGMQMRLDMFDAAVSSGIPTQHFHEAISNSENTPSHTQPQVCLGGPEEGAYDFPNNTLKEQDELAFESESVSISRAYSQGILDTFVHALRSSGVDLSEANVSVQIDLGRRSIASTSSSKDHENQFVNNPAVPCSGVDYCSEDSEQALKRLRTEAS 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0789 309 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 5 306 IPR044295 GO:0003700|GO:0006351|GO:0046983
Prci1g0789 309 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 20 97 IPR036638 GO:0046983
Prci1g0789 309 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 19 69 IPR011598 GO:0046983
Prci1g0789 309 MobiDBLite consensus disorder prediction 11 32 - -
Prci1g0789 309 FunFam BHLH domain class transcription factor 17 89 - -
Prci1g0789 309 Pfam Helix-loop-helix DNA-binding domain 21 70 IPR011598 GO:0046983
Prci1g0789 309 Coils Coil 66 86 - -
Prci1g0789 309 SMART finulus 25 75 IPR011598 GO:0046983
Prci1g0789 309 MobiDBLite consensus disorder prediction 99 122 - -
Prci1g0789 309 CDD bHLH_AtBIM_like 18 94 - -
Prci1g0789 309 Gene3D - 17 90 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0789 Prci-Chr1 8841796 8846915 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0789 4 265 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G69010 42.007 2.13e-52 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci1g0789 HLH 1.4e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0789 - - gmx:100791730 400.979