Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0787 ATGGTTCATGGAACTGATTTAGTTACCTTTGGAGTCTCTGCTGGTTTGGCCTTCGGAATTTTGATAGCTTGTCTTGTATGTTTGGTCATAAAGTGGTATAAGAAGCGTGCTCATCTTAGACATTGTGCAAATGAGCGTAGTCAAGCAACTCTTCCAATACGCACAAATGGATTCGAAACAAGCACTGACTTTAGTGCTTCTCTTACGAGCTCCATAGCTGCTCCAAGTTCAGACAATTTTCAGAAAGCTTCTCATTTTTCTTGGTGGAAACGTCCAAAGAAAGATCAGTTTGCATCCTCGTCAGGCATTCTTAGATACTCATTCAAAGAAATTCAGAAGGCAACACAAAATTTCACAGCTATGTTGGGACAAGGATCATTTGGCACAGTTTATAAAGCAACAATGCCTACTGGCGAGGTGGTAGCTGTGAAGGTGCTTAGTACTGATTCCAAACAAGGGGAAAAAGAATTCCAAACAGAGGTACTTTTGCTTGGAAGACTTCATCATCGGCATCTCGTAAATTTGTTAGGATATTGTGTAGATAAAGGGCAACGCATTTTGATTTATGAGTTCATGAGCAATGGAAGTCTTGAAAGGCTTATACATGGTGAAGAAAAGGTCTTAAGTTGGAATGAAAGGCTGCAAATTTCTGTTGATATTTCGCATGGAATTGAATACCTTCATGAAGGAGCAGTCCCGCCCGTCATACACCGTGATTTGAAATCTGCCAATATATTGTTAGATCACTCAATGCGAGCTAAGGTGGCTGATTTTGGGCTCTCAAAGGAGGAAATCTTTGATGGGCGAAATTCTGGCCTGAAAGGTACATATGCCTACATGGACCCATCATACATTTCCACTAACAAGTTCACAATGAAAAGTGACATTTACAGTTTCGGTATCATCATTTTCGAGCTCATCACTGCCATTCATCCTCAACAAAATTTGATGGAATACATTGACCTTGCTGCAATGGATCATGATGGTGTTGATGGAATAATTGACAAGAAAATAGTGGGAAAATGCAACATTGAAGAAGTGAGGAAGCTTGCCAAGATTGGACACAAGTGCTTGCACGAATCACCCAGGAAGCGTCCTTCAATTGGTGAGGTCTCTCAGGCTATATCCAGCATAAGACAGAGACGCCTTTTGAAAGAAAAGACCATGTCATTTGCTAGCTCTAGCTTTTCCAGAGCTTTGAGCCGACTTGAGGATCAACAGGTTGAGTTAAGCAGGATAACCACCATGGCCCACTAG 1257 0.4137 MVHGTDLVTFGVSAGLAFGILIACLVCLVIKWYKKRAHLRHCANERSQATLPIRTNGFETSTDFSASLTSSIAAPSSDNFQKASHFSWWKRPKKDQFASSSGILRYSFKEIQKATQNFTAMLGQGSFGTVYKATMPTGEVVAVKVLSTDSKQGEKEFQTEVLLLGRLHHRHLVNLLGYCVDKGQRILIYEFMSNGSLERLIHGEEKVLSWNERLQISVDISHGIEYLHEGAVPPVIHRDLKSANILLDHSMRAKVADFGLSKEEIFDGRNSGLKGTYAYMDPSYISTNKFTMKSDIYSFGIIIFELITAIHPQQNLMEYIDLAAMDHDGVDGIIDKKIVGKCNIEEVRKLAKIGHKCLHESPRKRPSIGEVSQAISSIRQRRLLKEKTMSFASSSFSRALSRLEDQQVELSRITTMAH 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0787 418 Gene3D Phosphorylase Kinase; domain 1 81 191 - -
Prci1g0787 418 FunFam serine/threonine-protein kinase PBS1-like 88 191 - -
Prci1g0787 418 ProSitePatterns Protein kinases ATP-binding region signature. 122 144 IPR017441 GO:0005524
Prci1g0787 418 ProSiteProfiles Protein kinase domain profile. 116 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g0787 418 SMART serkin_6 116 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g0787 418 CDD STKc_IRAK 122 373 - -
Prci1g0787 418 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 19 390 - -
Prci1g0787 418 SUPERFAMILY Protein kinase-like (PK-like) 87 373 IPR011009 -
Prci1g0787 418 Pfam Protein tyrosine and serine/threonine kinase 118 373 IPR001245 GO:0004672|GO:0006468
Prci1g0787 418 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
Prci1g0787 418 FunFam Calcium/calmodulin-regulated receptor-like kinase 2 192 399 - -
Prci1g0787 418 Gene3D Transferase(Phosphotransferase) domain 1 192 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0787 Prci-Chr1 8807897 8817838 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0787 98 371 Receptor kinase-like Gene Family AT3G19300 41.696 7.39e-71 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Prci1g0787 PK_Tyr_Ser-Thr 3.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0787 - - pcin:129289449 812.372