Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0751 ATGGAAGAAGATCAGCTTCGACAGCAACCTCAAGGATCCATTTCATTTCCAATTCAAGGTATGGAGTCCGTGGTGGCTACAGTGAGTGGTTACCATGGAACAGAGCGATTCAACCTTATTAAGTTGATTACAAATGCTGGTGCGAATTATGTTGGCGCAATGTCAAAATCAATCACGCACCTGATTTGTTGGCGATTTGAAGGAAAGAAATATAATCTTGCTCGGAAATTCAGAATAGTTATAATAAATCACCAGTGGATTGAAGACTGCTTAAAGCAAGGAAGGCGTGTTCCAGAGGAACCTTATAGATCGAAAAGTGGAGAAGAAGTGGGGCTAATATTGCTGCAAGTTCCACTTATTGTCGAGGCAAGTAGCTTGACTAAGAATAAAGTGCTTGATCATGGGTCAGATGACATTGGCTCCAAAAATCAAACGACTGATATCAGTTCTGGATCTTCTGGAAATTCTGTCCGGGAAGTTTCTTATTTAATGAACAAGGAGCCAACAACTTTTTCTTCCAGACAGTCAATGACAGCAAAAAGAAAGATCTCCAATTGTAATGGGGTGGCTACTAATGCTGGTCCTTCTCGCCACAGAAGAAGGCTTGTGAAAAAGAATATTCGAGGATTGTCAGCTCCCATACATGATTTGAGCTCTGAGGAGTACCTTAGCAGAACGGATACATTAAATACCGATGCTGCAGCCTCCTCTAGCCTTTCTGGTGGCGTCTCTTCTGATATTATTTTAGAAGGCAGAGAAGGATCAGATATTGTGTCAAATAATCAGAACATAGCTATCAATGGAGCATCAAATGCCACTGGACAAATCAATGATTCAAATGATTTATCAAGTTCAAGAATTTCAACTCTATGCGTACAAGATGCCTTGCTTACTACAGAGAAAACATCAGTAGATGATGGTTTTGAAAAATTCACAGATGGTATCCAGAATGGTAATGAGGCTAATTTACCTATTTCAACAGAGTTGTCATGTGTCATATGTTTGACGGAATTCAGCTCAACACGGGGGGTTTTGCCATGTGGACATAGGTTTTGTTATTCTTGTATTCAGAGTTGGGTTGATCACAGGACTGCAATGGGAAAAATCTCAACATGTCCCTTGTGCAAGTCAAGGTTTGAGAGCATCATTAAATATGAGGATGCAGCCCGGGATCAAAAGATATATTCCCAAACAATCCCATGCGGCGTTCCAATCTCGGATATTATTTTTCTTATGGATCGAGAACAACCGTATTATGGTTTTGAGTCTTCACAGACAGGTGCTTGTGTTGCTTGCCGGGGGCGAGAACCTGAGGATCTGCTCATGCGTTGCCATCTTTGCCATATTCGACAAATCCATTCTTACTGCCTGGACCCTCCTTTATTGCCATGGACATGCAATCACTGTTTCATGATCCCACTTGGGTGGTTTCTTCTGAATCAACATTGTCAAAGAGGATGGATCTTGCTCGCTTTATTCTCTTTGTTTGCTGCCTTTATGCAATTTTTATGA 1512 0.4114 MEEDQLRQQPQGSISFPIQGMESVVATVSGYHGTERFNLIKLITNAGANYVGAMSKSITHLICWRFEGKKYNLARKFRIVIINHQWIEDCLKQGRRVPEEPYRSKSGEEVGLILLQVPLIVEASSLTKNKVLDHGSDDIGSKNQTTDISSGSSGNSVREVSYLMNKEPTTFSSRQSMTAKRKISNCNGVATNAGPSRHRRRLVKKNIRGLSAPIHDLSSEEYLSRTDTLNTDAAASSSLSGGVSSDIILEGREGSDIVSNNQNIAINGASNATGQINDSNDLSSSRISTLCVQDALLTTEKTSVDDGFEKFTDGIQNGNEANLPISTELSCVICLTEFSSTRGVLPCGHRFCYSCIQSWVDHRTAMGKISTCPLCKSRFESIIKYEDAARDQKIYSQTIPCGVPISDIIFLMDREQPYYGFESSQTGACVACRGREPEDLLMRCHLCHIRQIHSYCLDPPLLPWTCNHCFMIPLGWFLLNQHCQRGWILLALFSLFAAFMQFL 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0751 503 Gene3D BRCT domain 19 103 IPR036420 -
Prci1g0751 503 MobiDBLite consensus disorder prediction 138 157 - -
Prci1g0751 503 SUPERFAMILY BRCT domain 18 104 IPR036420 -
Prci1g0751 503 SMART BRCT_7 18 94 IPR001357 -
Prci1g0751 503 SUPERFAMILY RING/U-box 324 382 - -
Prci1g0751 503 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 291 400 IPR013083 -
Prci1g0751 503 Pfam Ring finger domain 330 376 IPR001841 -
Prci1g0751 503 ProSiteProfiles BRCT domain profile. 13 104 IPR001357 -
Prci1g0751 503 PANTHER F5A8.9 PROTEIN 135 469 - -
Prci1g0751 503 SUPERFAMILY FYVE/PHD zinc finger 415 471 IPR011011 -
Prci1g0751 503 SMART ring_2 331 375 IPR001841 -
Prci1g0751 503 MobiDBLite consensus disorder prediction 133 157 - -
Prci1g0751 503 ProSitePatterns Zinc finger RING-type signature. 347 356 IPR017907 -
Prci1g0751 503 Pfam twin BRCT domain 24 86 IPR001357 -
Prci1g0751 503 ProSiteProfiles Zinc finger RING-type profile. 331 376 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0751 Prci-Chr1 7604162 7610185 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0751 58 102 Core DNA Replication Machinery Family AT4G02110 54.348 1.36e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0751 - - pcin:129291305 982.63