Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0733 ATGGTGATGAAGAAGACAATGATACTAGCAGCTCTTGGGAGGGTTTGCACTTTTTTTATTGAAATCATATCAACGGAATACCAAAAGATAGTTTTAAAAAATCTATATTTGAAATGTATGGAGATGCTCCTCAGTCACATGTATAAGAGTGTGGCGATGATTGCATATGGGGTTTCCTTGAGCTTTGAGATACTGTCATTGTCTGGGCCATTCATGCCGACTAACAACAAGGAACAAAGAAGCTGGTCAGGCTGCTTGAGTGTCTCCTTAGCAAGCCCTAATGGTCGTGTTAGAGGCGGTGGAATTGCTGGTCTTCTTATTGCTACCTGTCCTATGCAGTTAATGCTTTCAAGGACTATTGGAATGCCCATATGA 375 0.4133 MVMKKTMILAALGRVCTFFIEIISTEYQKIVLKNLYLKCMEMLLSHMYKSVAMIAYGVSLSFEILSLSGPFMPTNNKEQRSWSGCLSVSLASPNGRVRGGGIAGLLIATCPMQLMLSRTIGMPI 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0733 124 Pfam Plants and Prokaryotes Conserved (PCC) domain 7 117 IPR005175 -
Prci1g0733 124 Gene3D - 3 124 - -
Prci1g0733 124 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 61 116 IPR039605 GO:0003680
Prci1g0733 124 SUPERFAMILY AF0104/ALDC/Ptd012-like 61 121 - -
Prci1g0733 124 CDD DUF296 62 116 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0733 Prci-Chr1 7462510 7464514 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0733 62 116 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 61.818 1.32e-16 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0733 - - pcin:129305760 225.713