Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0732 ATGGTGATGAAGAAGACAATGATACTAGCAGCTCTTGGGAGGGTTTGCACTTTTTTTATTGAAATCATATCAACGGAATACCAAAAGATAGTTTTAAAAAATCTATATTTGAAATGTATGGAGATGCTCCTCAGTCACATGTATAAGAGTGTGGCGATGATTGCATATGGGGTTTCCTTGAGCTTTGAGATACTGTCATTGTCTGGGCCATTCATGCCGACTAACAACAAGGAACAAAGAAGCTGGTCAGGCTGCTTGAGTGTCTCCTTAGCAAGCCCTAATGGTCGTGTTAGAGGCGGTGGAATTGCTGGTCTTCTTATTGCTACCTGTCCTATGCAGGACTATTGGAATGCCCATATGAAGAAGAAGCTGCTGAAGAAAATTTCAAGTAAGCTTGGACCCCTACATGGTAACAAAGTCCACAACAACAAGTCCATTTGTGTCAAAAAGCTTTAA 456 0.4101 MVMKKTMILAALGRVCTFFIEIISTEYQKIVLKNLYLKCMEMLLSHMYKSVAMIAYGVSLSFEILSLSGPFMPTNNKEQRSWSGCLSVSLASPNGRVRGGGIAGLLIATCPMQDYWNAHMKKKLLKKISSKLGPLHGNKVHNNKSICVKKL 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0732 151 Pfam Plants and Prokaryotes Conserved (PCC) domain 7 112 IPR005175 -
Prci1g0732 151 CDD DUF296 62 109 IPR005175 -
Prci1g0732 151 SUPERFAMILY AF0104/ALDC/Ptd012-like 61 113 - -
Prci1g0732 151 Gene3D - 3 134 - -
Prci1g0732 151 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 61 113 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0732 Prci-Chr1 7462510 7464514 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0732 62 113 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 65.385 2.89e-16 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0732 - - pcin:129305760 298.516