Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0723 ATGGGGACACCAATAACACAATGTCTTCTCTGTTTCATGGCACTTGCCTGGCTTTCTTGTTCTTCTGCAAATGCTGTGCTCTCTCCTAAAGGAGTGAACTTTGAAGTTCAAGCTTTGATGGGTATAAAAGCTTCTCTTGTGGATCCTCATGGAGTTTTAGATACTTGGGATGGAGATTCTGTTGATCCTTGTAGCTGGACCATGGTCACCTGTTCTCCTGACAACCTTGTCGTTGGCCTGGGCACTCCAAGTCAAAGCTTATCTGGTACTTTGTCTCCCACCATAGGAAACCTCACAAACCTTCAGATTCTGTTGTTACAGAATAATAACATAACAGGTACAATTCCTTCAGAACTAGGGAAGCTTTCAAAGTTGCAGACTTTAGATCTATCAAATAACCTGTTCAATGGCGAAATTCCTTCCTCTTTAGGCCACATGAGCAAGCTGCAATACTTGAGGCTCAATAATAATAGTCTTTCTGGACAATGCCCAGAGTCACTGGCCAACATGACACAGCTTGCTTTTCTTGATTTGTCCTACAACAATTTGAGTGATCCTGTGCCCAGAATTCTAGCCAAATCATTCAGCGTTGTTGGGAATCCCCTCATCTGTGGTGTTGGGAAAGAAGAAACCTGCCATGGGATGACACTGATGCCTATGTCCATGAACTTGACCAATACAAAAGATGCTCAACCTTCTGAAAGACAAAAACCACACAAAGTGGCGATTGCCTTCGGTTTGAGCCTAGGATGTCTCTGTCTCATAGTTGTTTGTCTTGGACTATTTCTCTTGTGGAGGCATAAGCATAACCAGCAAGCATTCTTTGATGTCAAAGATCGTCATCATGAGGAAGTGTATCTAGGAAACTTGAAGAGGTTCCATTTCAGAGAACTTCAGATTGCTACAAACAACTTCAGCAACAAGAACATACTAGGAAAAGGCGGGTTTGGACACGTGTACAAGGGAGTGCTTCAAGATGGAACAGTGGTTGCAGTGAAGAGGCTTAGAGATGGGAATGCCATTGGTGGAGAAATACAGTTTCAGACAGAAGTTGAAATGATCAGCTTGGCAGTACACAGAAACCTTCTCAGACTCTATGGCTTCTGCATGACTCCCTCTGAAAGGCTTCTGGTTTACCCTTTCATGCCTAATGGCAGTGTTGCTTCTCGTCTCAAGGGAAAACCGGTGTTGGATTGGGGTACAAGGAAGCAGATAGCTTTAGGAGCAGCAAGGGGATTGCTATACCTTCATGAACAGTGTGATCCAAAGATAATTCACAGGGATGTGAAAGCTGCAAACATACTGCTTGATGAGTACTATGAGGCAGTGGTTGGAGATTTTGGATTGGCAAAACTTTTGGATCATCAAGACTCTCATGTTACTACTGCTGTGAGGGGTACTGTGGGGCACATTGCCCCTGAGTACCTCTCCACAGGGCAGTCCTCTGAGAAGACTGATGTCTTTGGATTTGGTATTCTTCTTCTTGAGTTGATCACTGGACTTAGGGCTCTTGACTTTGGAAAAGCTGCCAATCAGAAAGGGGCCATGCTTGACTGGGTGAAGAAAATTCATCAAGAGAAGAAACTTGAACTGCTTGTGGACAAGGATTTGAAGAGCAACTATGACACAATAGAGCTAGAAGAAATGGTGAAAGTGGCGCTTCTGTGTACTCAATACCTTCCAGGACAGAGACCTAAGATGTCAGAAGTAGTGAGAATGCTTGAAGGAGATGGACTTGCAGAGAGATGGGAAGCTTCTCAGAGAGCTCATCATGACTCAAACACAAGCAAATCCAAACAACCCCATGAATTCTCTTCATCAGATCGCTATTCTGATCTCACTGATGACTCTTCTTTGTTAGTCCAAGACATGGAGCTTTCAGGTCCAAGGTGA 1893 0.4395 MGTPITQCLLCFMALAWLSCSSANAVLSPKGVNFEVQALMGIKASLVDPHGVLDTWDGDSVDPCSWTMVTCSPDNLVVGLGTPSQSLSGTLSPTIGNLTNLQILLLQNNNITGTIPSELGKLSKLQTLDLSNNLFNGEIPSSLGHMSKLQYLRLNNNSLSGQCPESLANMTQLAFLDLSYNNLSDPVPRILAKSFSVVGNPLICGVGKEETCHGMTLMPMSMNLTNTKDAQPSERQKPHKVAIAFGLSLGCLCLIVVCLGLFLLWRHKHNQQAFFDVKDRHHEEVYLGNLKRFHFRELQIATNNFSNKNILGKGGFGHVYKGVLQDGTVVAVKRLRDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCMTPSERLLVYPFMPNGSVASRLKGKPVLDWGTRKQIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGLRALDFGKAANQKGAMLDWVKKIHQEKKLELLVDKDLKSNYDTIELEEMVKVALLCTQYLPGQRPKMSEVVRMLEGDGLAERWEASQRAHHDSNTSKSKQPHEFSSSDRYSDLTDDSSLLVQDMELSGPR 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0723 630 ProSitePatterns Serine/Threonine protein kinases active-site signature. 424 436 IPR008271 GO:0004672|GO:0006468
Prci1g0723 630 Gene3D Transferase(Phosphotransferase) domain 1 382 594 - -
Prci1g0723 630 ProSitePatterns Protein kinases ATP-binding region signature. 311 333 IPR017441 GO:0005524
Prci1g0723 630 Pfam Protein kinase domain 306 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g0723 630 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 12 585 - -
Prci1g0723 630 Pfam Leucine rich repeat N-terminal domain 35 72 IPR013210 -
Prci1g0723 630 Pfam Leucine Rich repeats (2 copies) 99 139 IPR025875 -
Prci1g0723 630 SMART serkin_6 305 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g0723 630 FunFam Putative LRR receptor-like serine/threonine-protein kinase 32 214 - -
Prci1g0723 630 Pfam Leucine rich repeat 141 183 IPR001611 GO:0005515
Prci1g0723 630 Gene3D Ribonuclease Inhibitor 32 214 IPR032675 -
Prci1g0723 630 SUPERFAMILY L domain-like 35 197 - -
Prci1g0723 630 ProSiteProfiles Protein kinase domain profile. 305 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g0723 630 FunFam Somatic embryogenesis receptor-like kinase 1 382 594 - -
Prci1g0723 630 SUPERFAMILY Protein kinase-like (PK-like) 282 575 IPR011009 -
Prci1g0723 630 MobiDBLite consensus disorder prediction 584 610 - -
Prci1g0723 630 Gene3D Phosphorylase Kinase; domain 1 274 381 - -
Prci1g0723 630 MobiDBLite consensus disorder prediction 584 630 - -
Prci1g0723 630 FunFam Somatic embryogenesis receptor kinase 1 274 381 - -
Prci1g0723 630 SMART LRR_typ_2 146 169 IPR003591 -
Prci1g0723 630 SMART LRR_typ_2 122 145 IPR003591 -
Prci1g0723 630 SMART LRR_typ_2 98 121 IPR003591 -
Prci1g0723 630 SMART LRR_typ_2 170 193 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0723 Prci-Chr1 7384670 7389178 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0723 5 630 Receptor kinase-like Gene Family AT5G16000 76.190 0.0 980
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Prci1g0723 Pkinase 1.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0723 - - gmx:100798412 1025.39