Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0718 ATGGCTTCTAAAATGGAAACCGAGAATTCTACCGATGCTTCTCCGTCCTCGCCAAAGAATATATACAAAGATCCAGATGACGGCCGGCAGCGATTTTTACTTGAGTTGGAATTTGTTCAATGCCTGGCTAATCCCACCTACATTCACTATTTGGCTCAGAATCGATATTTTGAAGATGAAGCATTCATTGGATACTTGAAGTACCTTCAATATTGGCAACGACCTGAATACATCAAGTTTATTATGTATCCTCACTGCCTTTTCTTTCTTGAACTTCTTCAGAATGCAAATTTTCGAAATGCAATGGCACATCCTGGTAATAAGGAACTTGCACATAGACAACAATTCTACTTCTGGAAGAACTATAGGAACAATCGATTAAAACACATTTTACCCAGGTCACTTCCTGAATCTAGCACCACGCCTGCACCTCCTGCGGCTGCCTCGACTCTGTCTCAGCTGCCGGTGCCTGCTCTGCCAGCAGTACCGGCTGCAAATGCTCCAGTGACGATATCATCTGCTCAGGCTCTTTCTCCAATGCCATATGGTATGCCGCCTGGATCTTCCCTTGCAAAAAATGATATGAGGAACCCTGCACTTGATAGGAGGAAGAGAAAGTAA 621 0.438 MASKMETENSTDASPSSPKNIYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYIKFIMYPHCLFFLELLQNANFRNAMAHPGNKELAHRQQFYFWKNYRNNRLKHILPRSLPESSTTPAPPAAASTLSQLPVPALPAVPAANAPVTISSAQALSPMPYGMPPGSSLAKNDMRNPALDRRKRK 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0718 206 Gene3D Mediator of RNA polymerase II, submodule Med31 (Soh1) 17 119 IPR038089 -
Prci1g0718 206 MobiDBLite consensus disorder prediction 176 206 - -
Prci1g0718 206 MobiDBLite consensus disorder prediction 1 18 - -
Prci1g0718 206 MobiDBLite consensus disorder prediction 1 23 - -
Prci1g0718 206 FunFam Mediator of RNA polymerase II transcription subunit 31 18 119 - -
Prci1g0718 206 Pfam SOH1 30 122 IPR008831 GO:0003712|GO:0006355|GO:0016592
Prci1g0718 206 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31 1 206 IPR008831 GO:0003712|GO:0006355|GO:0016592
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0718 Prci-Chr1 7324005 7328736 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SOH1 Prci1g0718 Med31 2.7e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0718 K15153 - gmx:100527879 331.257