Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0716 ATGAATTTTCTCGTCGATTCCGACTCGCCAAACACCACTTTAATGGAATTTCACCTCCAAACACTAATCTGCAACAACGGTCTTCAACTCCATCACCAAAATTCCCAGATCAACCCTTTTCCTCTTCCTCAACTTCAGGACGTGGCGTCTCAGTCGACTTCCGACGAAGCGGAGGATCAGATTCAGGGGAAGAGCACGGCGGCAGTGGCGGCGAACGAGAGGAGACACAGGAGGATGATATCGAACAGAGAGTCGGCGCGTAGGTCACGCGCCAGGAAGCAGAAGCAGCTAGACGAGCTCTGGTCACAGGTTGTTTGGCTGCGGAGCGAGAATCGCCAACTCCTGGATAAGCTTAACCTTGTCTCGGATAGCCATGACCGAGCCCTTCAAGAGAATGTTCGTCTCAAACAGGAAGCTTCTGAGCTGCGTCAGATGCTCTGTGACATGCAGTTACAATCCCCTGCTTCTCAACTTCCTTGA 480 0.5188 MNFLVDSDSPNTTLMEFHLQTLICNNGLQLHHQNSQINPFPLPQLQDVASQSTSDEAEDQIQGKSTAAVAANERRHRRMISNRESARRSRARKQKQLDELWSQVVWLRSENRQLLDKLNLVSDSHDRALQENVRLKQEASELRQMLCDMQLQSPASQLP 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0716 159 Coils Coil 125 145 - -
Prci1g0716 159 MobiDBLite consensus disorder prediction 70 93 - -
Prci1g0716 159 FunFam BZIP transcription factor 72 123 - -
Prci1g0716 159 MobiDBLite consensus disorder prediction 47 93 - -
Prci1g0716 159 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 72 135 IPR004827 GO:0003700|GO:0006355
Prci1g0716 159 MobiDBLite consensus disorder prediction 47 67 - -
Prci1g0716 159 Gene3D - 72 127 - -
Prci1g0716 159 SMART brlzneu 70 134 IPR004827 GO:0003700|GO:0006355
Prci1g0716 159 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 16 155 IPR044521 -
Prci1g0716 159 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 77 92 IPR004827 GO:0003700|GO:0006355
Prci1g0716 159 SUPERFAMILY Leucine zipper domain 74 123 IPR046347 GO:0003700|GO:0006355
Prci1g0716 159 Pfam bZIP transcription factor 73 131 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0716 Prci-Chr1 7319936 7320769 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0716 17 156 bZIP Transcription Factor Family AT3G30530 55.319 1.18e-41 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci1g0716 bZIP_1 4.9e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0716 - - aprc:113863596 154.066