Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0708 ATGGAGATCGGCGAACCATCATGCATCATTGTAGCCGAGTTGCCCACGCTACGGGAACTTTTTCAGCTCGAAGACGACGCACGGAGGGAAGCCACCGGCGACGACAGTATCACGACAGAGTTTCACACGCCTGACAGAACTGATTCCAGCACTGAGCCAGCTCGCTCGGTGCCTTTCCTGCTCTCGTTTAGTAATCTCACGTACAGTGTGAAGGTCCGCCGGAAAACGAACTTCTCAATGCTGTTTTCGCGATCAAGAAATAACCATCTCGGAGCACCAGACACTAAGACTCTTTTGAATGATATCTCCGGCGAGGCTCGCGACGGTGAGATTCTTGCCATTATAGGTGCCAGTGGATCGGGGAAATCGACTCTGATTGATGCCTTGGCCAACCGAATAGCCAAAGGAAGCTTGAAAGGGAGCGTGAAATTGAACGGCGAGGCCTTAGAATCACGGCTTCTGAAATCGATTTCAGCTTATGTAATGCAAGACGACCTTCTCTTTCCGATGCTCACGGTGGAAGAGACTCTGATGTTCGCAGCTGAATTCCGATTACCACACAGGCTCTCTAAATCCAAGAAGAAGAAGCGAGTACAAGCTCTAATCGACCAGCTCGATCTCAGAAACGCTGCGAAAACCATCATCGGCGATGAAGGTCACCGTGGGGTATCCGGCGGCGAACGACGCCGCGTCTCAATCGGCATTGATATAATCCACGATCCAATCATATTGTTCCTCGATGAACCTACATCAGGACTGGATTCGACGAGCGCATTCACGGTGGTGAAGATCTTGCAGAAAATCGCACAAACCGGAAGCATCGTCGTCACGTCGATCCACCAACCAAGTTCACGAATACTTGGTCTTGTGGATAGAATGATCTTCTTGTCTCACGGAGAAATCATGTTCAATGGTTCACCGACGCAACTTCCACTCTTCTTCGCTGAATTTGAACACCCAATACCAGAAAATGAGAACCAGACCGAGTTTGCATTGGACCTAATTCGCGAGCTAGAAGAAGGGTCATCTAGTGGAACTCATAGATTGGTGGAGTTTAACAAATCGTGGCAGATCAAGAAGCAAACGGGAAGCAATAGCACAGAAGGTGAATATCACCATGGATTATCATTGAAAGAAGCGATCAAGACAAGCATCTCGAGGGGAAAACTAGTGTCAGGAATCACAAAGAGGACTGATAGTGATAATAATAACGCAATAATAAGATCAACTTCAAAGGTACCAACATTTGCGAACCCATTGTTGATTGAAGTAGCAAAGCTCTCAATAAGATCATGCACCAATTCACGAAGAGTTCCTGAAGTATTCAGAACTCGATTGGCTATCGTTTTGATTACTGGCTCTCTTCTAGCCTCAGTGTTTTGGCATTTAGATGACTCTCCAAAAGGGGCTCAAGAAAGACTTAGCTTCTTCGCTTTTGCCATGTCTTCAACCTTCTACACAACAGCAGAAGCACTCCCTGTGTTCCTCCAAGATCGATACATTTTCATGAAAGAAACTTCTCACAACACTTATCGTATATCCTCTTACATCGTTTCTCACGCTCTTGTATCACTGCCTTCATTGCTTGTCCTCTCTTTAGCTTTCGCAGCGACGACGTTTTGGGCTGTTGGGCTTGAAGGAGGATGGTTCGGCTTCTTGTTCTATTTCCTCTTCATACTTGCCTCTTTCTGGGCAGGTAACTCATTCGTGAGCTTCCTCTCCGGCGTGCTACCCCACGTGATGGTAGGGTACACGATAGTGGTGAAATCATTGGCTTATTTCTTGCTCTTCAGTGGATTCTTCATTAACAGAGACAGAATTCCAGTTTATTGGATCTGGTTTCACTACTTGTCTTTGGTGAAATACCCATATGAAGCTGTGATGCAGAACGAGTTTGAAGATGACTCATCAGCGCATCATTGCTTTGTGAAAGGAGTGCAGGTTTTCGATAATTCGCCGGCGCTCGGTGAGTTGCCGGAATCCATGAAACTGAAGTTGTTGGAGAGCTTGAGTAAAACGTTGGGGATGAACATCACGAGCTCAACGTGCTTGACCACTGGTTCTGATATATTGCAGCAGAATGGGATTACACAGCTGAGCAAGTGGAATTGTTTGTGGGTAACTGTGGGTTGGGGATTTTTGTTTAGGGCTTTGTTTTACTTGTCGTTGTTGCTGGCGAGCAAAAACAAGAGGAGGTAG 2199 0.4648 MEIGEPSCIIVAELPTLRELFQLEDDARREATGDDSITTEFHTPDRTDSSTEPARSVPFLLSFSNLTYSVKVRRKTNFSMLFSRSRNNHLGAPDTKTLLNDISGEARDGEILAIIGASGSGKSTLIDALANRIAKGSLKGSVKLNGEALESRLLKSISAYVMQDDLLFPMLTVEETLMFAAEFRLPHRLSKSKKKKRVQALIDQLDLRNAAKTIIGDEGHRGVSGGERRRVSIGIDIIHDPIILFLDEPTSGLDSTSAFTVVKILQKIAQTGSIVVTSIHQPSSRILGLVDRMIFLSHGEIMFNGSPTQLPLFFAEFEHPIPENENQTEFALDLIRELEEGSSSGTHRLVEFNKSWQIKKQTGSNSTEGEYHHGLSLKEAIKTSISRGKLVSGITKRTDSDNNNAIIRSTSKVPTFANPLLIEVAKLSIRSCTNSRRVPEVFRTRLAIVLITGSLLASVFWHLDDSPKGAQERLSFFAFAMSSTFYTTAEALPVFLQDRYIFMKETSHNTYRISSYIVSHALVSLPSLLVLSLAFAATTFWAVGLEGGWFGFLFYFLFILASFWAGNSFVSFLSGVLPHVMVGYTIVVKSLAYFLLFSGFFINRDRIPVYWIWFHYLSLVKYPYEAVMQNEFEDDSSAHHCFVKGVQVFDNSPALGELPESMKLKLLESLSKTLGMNITSSTCLTTGSDILQQNGITQLSKWNCLWVTVGWGFLFRALFYLSLLLASKNKRR 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0708 732 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 46 720 - -
Prci1g0708 732 Pfam ABC-2 type transporter 427 632 IPR013525 GO:0016020|GO:0140359
Prci1g0708 732 SMART AAA_5 108 300 IPR003593 GO:0016887
Prci1g0708 732 CDD ABCG_EPDR 61 305 - -
Prci1g0708 732 Pfam ABC transporter 99 251 IPR003439 GO:0005524
Prci1g0708 732 ProSitePatterns ABC transporters family signature. 223 237 IPR017871 GO:0005524|GO:0016887
Prci1g0708 732 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 61 323 IPR003439 GO:0005524
Prci1g0708 732 MobiDBLite consensus disorder prediction 28 49 - -
Prci1g0708 732 FunFam ABC transporter G family member 6 88 314 - -
Prci1g0708 732 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 94 310 IPR027417 -
Prci1g0708 732 MobiDBLite consensus disorder prediction 28 53 - -
Prci1g0708 732 Gene3D - 85 312 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0708 Prci-Chr1 7220752 7224885 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0708 93 310 Calmodulin-binding Proteins AT2G36910 28.444 1.24e-12 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0708 K05681 - qsa:O6P43_006042 955.281