Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0685 ATGAAGAACTTCGATTCAAAGAGCGGTTTCAGTTCGGATTCTAGGACCTTCCACAGTCTCAGACCCCCTGTTCATCTTCCTCCTCCTCACTCTCCTCTCTCGGCTTCACACTACGCTCTCTCTCTCCATCTCAAATCGCCCTGGTCTGACTCAGTCACCGCCCTCGTGGACTCCGCCTCCGGCCACCGAGTTTCCTTCTCTGAGTTCATCCATTCCTCACAAACATTAGCTTCCAATCTTCAATCTCTAGTACGCCTCTCCAAAGGCGACACAGCCTTTGTATTATCCCCCAACCTCGTTAAGGTTCCGATCCTCTACTTCGCCCTGCTTTCCCTCGGCGTCGTAGTCTCTCCGGCTAACCCAATCAGCACACCCGCTGAGATTTCCCACCTCTTTCAGCTGTCGTCACCGGCCATTGCCTTCTCCACGTCGTCCACAGCGCACAAACTTCCGCACAACCTGCTGCGACTCGGAGTCATACTTCTCGACTCGCCCGAGTTTGACTCGCTGATGACGACGACGACGACGAAACCAGCGGTCCCGCTCGTTGAGGTGAGCCAATCGGACTTAGCTGCCATTTTGTACTCTTCTGGGACCACCGGGAAGGTGAAGGGAGTGATGTTGACTCATCGGAATCTGATAGCGTTGGCAGCGAGTTACGACGCCACTCGCTCTCAGAGAGAAAGGCCGGCAGTTTTCCTCTACACGATACCATATTTTCACGTGTACGGCTTCACGTACAGTCTGAGGTCGGTGGTTTTATCGGAGACGGTGGTGTTGATGGAGAGGTTCCGTATGGAGAAGATGTTGAAGGCAGTAGATGAGTTCAGAGTGACTCACCTAGCGGTGGCTCCACCGGTGGTGGTGGCTATGGCGAAAGGAGATGTAACGGACGGCTACGATTTGAGCTCGTTGGAAGGCATCGCTTGCGGGGCGGCTCCGCTAGGAAAGGACGCCGCCGCGGCTTTCAAATCGAAGTTTCCCAGAGTCGTGATTGTCCAGGGCTATGGCTTAACAGAAACAACGGCATCGATCTGTCGAACAACAGGAGAAGCAGAAACGATTAAAACAGGAACAACGGGGAAGCTAATAGCAGGTGTTGAAGCCAAAATTGTGGACCCTGACACTGGACTAGCCATGTTTCCTGGACAAGAAGGTGAACTTTGGCTTAGAGGACCTTCTATAGCGAAAGGGTATGTAGGGGATCCAGAAGCAAATTCGGCGACTTTTGTAGATGGGTGGTTGAGGACTGGAGACTTGTGCTACATTGACCACCAAGGCTACCTTTATGTTGTTGACAGGCTCAAAGAATTGATCAAATACAAAGGATATCAGGTGGCCCCTGCGGAGCTGGAGAACTTGCTTCATTCTCACTCACAGATCAAGGACGCTGCGGTTATTCCTTACCCTGATGAGGAAGCAGGGCAGGTGCCGATGGCCTTTGTGGTGAGACAGCCTCAGAGTTCACTCAGTGAAGCCGATGTAATTGATTTTATCGCCAAACAGGTTTCAGCGTACAAGAAAATAAGGCGCGTATTATTTGTGAGTTCCATACCAAAGAATGCAGGGGGGAAAATTTTGAGGAAAGACTTGAGTAAATTTGCCCTCCATCAATCTATATCTAAATTGTAA 1632 0.511 MKNFDSKSGFSSDSRTFHSLRPPVHLPPPHSPLSASHYALSLHLKSPWSDSVTALVDSASGHRVSFSEFIHSSQTLASNLQSLVRLSKGDTAFVLSPNLVKVPILYFALLSLGVVVSPANPISTPAEISHLFQLSSPAIAFSTSSTAHKLPHNLLRLGVILLDSPEFDSLMTTTTTKPAVPLVEVSQSDLAAILYSSGTTGKVKGVMLTHRNLIALAASYDATRSQRERPAVFLYTIPYFHVYGFTYSLRSVVLSETVVLMERFRMEKMLKAVDEFRVTHLAVAPPVVVAMAKGDVTDGYDLSSLEGIACGAAPLGKDAAAAFKSKFPRVVIVQGYGLTETTASICRTTGEAETIKTGTTGKLIAGVEAKIVDPDTGLAMFPGQEGELWLRGPSIAKGYVGDPEANSATFVDGWLRTGDLCYIDHQGYLYVVDRLKELIKYKGYQVAPAELENLLHSHSQIKDAAVIPYPDEEAGQVPMAFVVRQPQSSLSEADVIDFIAKQVSAYKKIRRVLFVSSIPKNAGGKILRKDLSKFALHQSISKL 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0685 543 CDD 4CL 27 531 - -
Prci1g0685 543 ProSitePatterns Putative AMP-binding domain signature. 193 204 IPR020845 -
Prci1g0685 543 Pfam AMP-binding enzyme C-terminal domain 450 525 IPR025110 -
Prci1g0685 543 Pfam AMP-binding enzyme 53 441 IPR000873 -
Prci1g0685 543 Gene3D - 437 539 IPR045851 -
Prci1g0685 543 Gene3D - 30 436 IPR042099 -
Prci1g0685 543 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 11 533 - -
Prci1g0685 543 FunFam 4-coumarate--CoA ligase 2 437 538 - -
Prci1g0685 543 SUPERFAMILY Acetyl-CoA synthetase-like 53 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0685 Prci-Chr1 7004420 7012431 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0685 4 543 Monolignol Biosynthesis Gene Families AT5G63380 51.449 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0685 K01904 - qsu:111992510 700.279