Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0652 ATGGAGACTCCCTGCTCTTGTAGTGGCAGTTTGAAGTATGCACATCGAAAATGTGTCCAAAGATGGTGCAATGAGAAAGGAGATACTATCTGTGAGATTTGCCAACAGCAATTCAAGCCTGATTATACAGCACCACCTCCGCCTCCACTATTCCATTATGGCAGTTCCCCATTAAATTTTAGAGGTAACTGGGAGATTTCCAGAAGGGATCTGCAAAATCATCAGTTCATAGAAATGTTTGCTGCTAACCGTGAATTCTCAGACACTGATGAGGAATACTCGGTTCCGTCAACAGGGAGTCTGGTCTGCTTCCGCATCATTGCAATTATTCTTATTGCTCTTCTTGTTTTACGCCATACCCTTCCAATTATACTCAGCGGAGCTGGGGAATATTCATTGACTCTCTATATGTTACTGGTCATTAGAACAATTGCAATACTTCTACCTGTATGTATAATGGTTAAGGCATTTACCATTATCCAACGGCGACGATACCAGGATCATTACGCCTCTATTCTGCAACATGAGGAGAGTGAGCTGGAACAGCCTCAGTCTCGTGTCATTCATATCTTGTGA 576 0.4271 METPCSCSGSLKYAHRKCVQRWCNEKGDTICEICQQQFKPDYTAPPPPPLFHYGSSPLNFRGNWEISRRDLQNHQFIEMFAANREFSDTDEEYSVPSTGSLVCFRIIAIILIALLVLRHTLPIILSGAGEYSLTLYMLLVIRTIAILLPVCIMVKAFTIIQRRRYQDHYASILQHEESELEQPQSRVIHIL 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0652 191 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 1 166 IPR033275 -
Prci1g0652 191 SMART ringv_2 1 35 IPR011016 GO:0008270
Prci1g0652 191 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 45 IPR013083 -
Prci1g0652 191 CDD RING_CH-C4HC3_MARCH 1 35 - -
Prci1g0652 191 Pfam RING-variant domain 2 34 IPR011016 GO:0008270
Prci1g0652 191 Pfam Protein of unknown function (DUF3675) 40 156 IPR022143 -
Prci1g0652 191 ProSiteProfiles Zinc finger RING-CH-type profile. 1 41 IPR011016 GO:0008270
Prci1g0652 191 SUPERFAMILY RING/U-box 3 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0652 Prci-Chr1 6635867 6641071 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0652 1 35 C3H Transcription Factor Family AT2G37950 51.429 3.84e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0652 - - qsa:O6P43_005661 278.1