Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0622 ATGGAACTTCGGCCACCTTCTTCCACCGCCACACTCGCCGGCGGCGGCAGCGCCAAGCTCCGTCTTATGTGCAGTTACGGTGGCCACATAGTCCCTCGTCCTGGCCCCAACAAGTCCTTCTGCTACGTCGGCGGCGACACCCGCATCGTATCCGTCGACCGCCGCACCGTCACCACCCTCGACTTGCTTGTTTCTCACCTCACCGCCACCCTCTCCGTCGACTTCTCCTTCACTTTAAAGTACCAGCTTCCCCATCTTGACCTCGACTCTCTCATTTCTCTCACCTCCGATGAGGATTTCCAAATCTTCTTCGACGAGTTCGACCGCCTCTGTTCCACCACTCCTTCTGCTGCACCTTCCCGCATCAGAGTATTCCTCTTCCCTGTTTATTCTGTTCCGGGTTCAGGTCGCCCCGTCATTCGGCACCCGAAAACCGAGTCTTGGTTCTTCGATGCGCTTAAGAGCGCCAAGATTCTGCAGAAGGGACTCGGTGAGGCTCATGGGTATGGCTATTGTCACGGGTCGGGTGTTGAGGGGCACGGCTTTGTCTCTTGGGGTCCGGATACGATGGTTTTGGAGACGAGTTCGTCTTTTGAGTCAACTTCGTCCTCGGCTTCGTTGACTAATTTGCTTCCTTTGAAATCTCAGAGTAATGAAGTAGATAATGAGTTTGTTTCGCAGGATAGTAAAGCTATGTTGATACAGACCAACGCTGTTGTTCCAAGTGATAATTACTCTTTTTCAAACATAGAACCTCAGCATCAGAATGTGTTGTACCAAGATGCCATTGTTCATGCTAATTCTTCAATAGAAAGTTCAAATAACACCAACATGGAAGCAGGGTACAACAAGAACAACACTTCATTTCCATACTTGAATCAACAGGTTCAGAGACAACATGGGCAATTTGTACCATTTCAACATATGACATATCATCAACCTAATCAACCCTACCCAATATATTACCTCGTTCCTTATGCTCAACCACCACCTTACTGTTTCAATACAACAGCTTCCAATGACGCGAACCTTAATTCTACCTTCATCACTTCTCAGGATTATCGCAGGCCAACCAGTTCATTGACGACATTGCATGGTGATAAGCAACAAGGAGAAATTTATGTTCCTCCGATGTATGTTCAGTCTCAAAATGCTTGCAGCGGTGGTGGTGATGGCAATGATAATGGCGGTGATGAGCTTGATAATGTTCTGATTTACAAGTCTCAACCTCCTCCACCGTCATCGTCGACGAATTCTCAGTTCAAATCCGTGATGAAAGATATGAAGTTGCTTGCTCAAGATGAAGACATCAAATAA 1317 0.4753 MELRPPSSTATLAGGGSAKLRLMCSYGGHIVPRPGPNKSFCYVGGDTRIVSVDRRTVTTLDLLVSHLTATLSVDFSFTLKYQLPHLDLDSLISLTSDEDFQIFFDEFDRLCSTTPSAAPSRIRVFLFPVYSVPGSGRPVIRHPKTESWFFDALKSAKILQKGLGEAHGYGYCHGSGVEGHGFVSWGPDTMVLETSSSFESTSSSASLTNLLPLKSQSNEVDNEFVSQDSKAMLIQTNAVVPSDNYSFSNIEPQHQNVLYQDAIVHANSSIESSNNTNMEAGYNKNNTSFPYLNQQVQRQHGQFVPFQHMTYHQPNQPYPIYYLVPYAQPPPYCFNTTASNDANLNSTFITSQDYRRPTSSLTTLHGDKQQGEIYVPPMYVQSQNACSGGGDGNDNGGDELDNVLIYKSQPPPPSSSTNSQFKSVMKDMKLLAQDEDIK 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0622 438 MobiDBLite consensus disorder prediction 384 427 - -
Prci1g0622 438 SUPERFAMILY CAD & PB1 domains 39 128 - -
Prci1g0622 438 CDD PB1_UP2 23 127 - -
Prci1g0622 438 MobiDBLite consensus disorder prediction 408 424 - -
Prci1g0622 438 Pfam PB1 domain 39 127 IPR000270 GO:0005515
Prci1g0622 438 SMART PB1_new 35 129 IPR000270 GO:0005515
Prci1g0622 438 PANTHER OS05G0427100 PROTEIN-RELATED 12 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0622 Prci-Chr1 6366575 6368948 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0622 20 144 MAP Kinase Kinase Kinase AT1G04700 43.200 3.75e-18 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0622 - - pcin:129291086 837.41