Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0617 ATGAATCATTCTCTTGCCTCATGTTTCATCTTCTTCCTTCTTCTTCTTCTACTTTTCATCATAACCGTTGGCGCTGATGATAGATTCACAAACTGTAGCAGCCGGATCAGCTGTGGAACCGTCGACAACGTTGGATATCCATTCTGGGGAGAAAACAGAGCAGAATACTGTGGTCAGCCTGGTTTCCAACTTGCTTGCCAAGACAATACTCCAAAGCTGATCTTCAACGCTGTCACTTATCGGATTCTCAAGTTCAACTTGAGTGATAAGAGTCTCACTGTGGCTAGGGATGATTACTGGCAAACTCTATGTCCAAATCAGTACTTAAACACTAGCTTTGATAGCACCTCTTTCAAGCTTGCCGATGGGTTTCAAGACATTGCCTTGCTATATGATTGCATCAAGAGTTTCAATTCAGCGGGTCAATTCACCACTTCATCTAGCGCAGAGTGTTCGAAGCAAAAGGTGTACTACGGGAGCTTATCTACTTACAATATTGATCTAACAGGAATTTGCAAGGTCGTTGTTGTTCCTATAGCGAGTGCCAATGTTAATTTGATATTTTCCGATGAAAAGGAAATTGAAGACGCAATAAAAGATGGTTTTGAGTTGGGATGGAGTGTTAACAACGAGCAATACAACAATTGCGTCAATTCTGGGGGGCAGTGCGGGTATATTAATAATAAGTTCACATGTTTTTGCAGCAACGGGCGTCAAGGAACTACGTGTTCAGGTAAAAGCTCCAAGGCTGTTGCTATAGGGGTTGGTGTTGGAGTTGCAGTATTTTTTGGCATTGTTATTATGTTTTTGTTGTGCTTTGTCATGAAGAGAAGAAGGAAAAGAAAAGCTGAAGAGTTGAAAAGCAAGAACCTCTTGTCGCCATCTTTAAGCAACATTAACGTTAATGGCGATGTAACAACGTCTGCAACTACAACTAATATGGCTCAAACTGCTCCTTCTTACCCTACCTCCAAGTTTCACTCGGTGCAGAAGAGTTTTTATTTTGGAGTTCAAGTTTTTAGCTATGAAGAACTTGAAGAAGCTACCCAAAATTTTGACCCTTCCATGGAGCTTGGCGATGGAGGCTTCGGAACTGTTTACTATGGAACCCTAAAAGATGGACGTATAGTTGCAGTAAAACGCCATTATGAAAGCAACGCGAAGCGTGTGGAGCAATACATGAATGAAGTTGAGATTCTAGGTCGCTTACGACACGACAACCTCGTGGCACTTTATGGATGTACATCCAGACATAGTCGAGAACTCATCCTTGTCTATGAATACATTCCTAACGGAACAGTTGCCGACCACCTCCATGGCAAACGATCTTACTCAACTTTGCTCCCTTGGCCTATACGTATGAACATCGCTGTAGAAACAGCCGAAGCACTATCCTTCCTTCACAAATCAGATGTCATACACCGTGATGTCAAAACCAACAACATTCTCCTCGACAATGATTTTAGAGTTAAGGTTGCTGATTTTGGTCTCTCACGTTTGTTCCCTAACCATGTCACGCATGTGTCCACTGCTCCCCAAGGAACACCTGGTTATGTCGATCCTGAGTATTACCAGTGCTTTCAACTCACTGATAAGAGTGATGTTTATAGTTTTGGGGTCGTATTAATCGAGCTTATATCATCCTTACAAGCTGTGGATGTTTCTAGGAGTCATCGTGACATAAACTTAGCCAACATGGCACTGAATAAGATTCAAGACAAAGCAGTGCATGAGTTGGTTGATCCATATTTAGGGTTCGAGAAGGACTATGGTGTGAGGCAGATGATTATAGGAGTAGCAGAATTAGCGTTCAGGTGTTTGCAGAAGGAGAGAGACATGAGACCTTCCATGGAAGAGGTGGTTGAGATCTTGAGAGAAATTCAGAGGAAGGAGTTTGTAGGGGAAAAAGAAGTGGTGATGATGGATAAAGTAGAAGAACTTGTGCTTTTGAAAAATGGTAGTGCCCCATTTTCACCAGATTCAGTTACGGATAAATGGGTTAGCTACTCTTCTACGTCTAATTCTTCACAGAATCTATTGTCTCCTTCTGCTGGTAAGACTTAG 2064 0.421 MNHSLASCFIFFLLLLLLFIITVGADDRFTNCSSRISCGTVDNVGYPFWGENRAEYCGQPGFQLACQDNTPKLIFNAVTYRILKFNLSDKSLTVARDDYWQTLCPNQYLNTSFDSTSFKLADGFQDIALLYDCIKSFNSAGQFTTSSSAECSKQKVYYGSLSTYNIDLTGICKVVVVPIASANVNLIFSDEKEIEDAIKDGFELGWSVNNEQYNNCVNSGGQCGYINNKFTCFCSNGRQGTTCSGKSSKAVAIGVGVGVAVFFGIVIMFLLCFVMKRRRKRKAEELKSKNLLSPSLSNINVNGDVTTSATTTNMAQTAPSYPTSKFHSVQKSFYFGVQVFSYEELEEATQNFDPSMELGDGGFGTVYYGTLKDGRIVAVKRHYESNAKRVEQYMNEVEILGRLRHDNLVALYGCTSRHSRELILVYEYIPNGTVADHLHGKRSYSTLLPWPIRMNIAVETAEALSFLHKSDVIHRDVKTNNILLDNDFRVKVADFGLSRLFPNHVTHVSTAPQGTPGYVDPEYYQCFQLTDKSDVYSFGVVLIELISSLQAVDVSRSHRDINLANMALNKIQDKAVHELVDPYLGFEKDYGVRQMIIGVAELAFRCLQKERDMRPSMEEVVEILREIQRKEFVGEKEVVMMDKVEELVLLKNGSAPFSPDSVTDKWVSYSSTSNSSQNLLSPSAGKT 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0617 687 Pfam Protein kinase domain 355 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g0617 687 SUPERFAMILY Protein kinase-like (PK-like) 330 628 IPR011009 -
Prci1g0617 687 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 10 672 IPR044652 GO:0004672
Prci1g0617 687 ProSitePatterns EGF-like domain signature 1. 232 243 IPR000742 -
Prci1g0617 687 FunFam Wall-associated receptor kinase-like 20 429 637 - -
Prci1g0617 687 Gene3D Phosphorylase Kinase; domain 1 325 428 - -
Prci1g0617 687 ProSiteProfiles EGF-like domain profile. 207 244 IPR000742 -
Prci1g0617 687 Pfam Wall-associated receptor kinase galacturonan-binding 32 96 IPR025287 GO:0030247
Prci1g0617 687 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Prci1g0617 687 Pfam Wall-associated receptor kinase C-terminal 162 236 IPR032872 -
Prci1g0617 687 Gene3D Transferase(Phosphotransferase) domain 1 429 646 - -
Prci1g0617 687 SMART serkin_6 352 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g0617 687 CDD STKc_IRAK 358 627 - -
Prci1g0617 687 ProSitePatterns Protein kinases ATP-binding region signature. 358 380 IPR017441 GO:0005524
Prci1g0617 687 ProSiteProfiles Protein kinase domain profile. 352 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g0617 687 FunFam receptor-like protein kinase FERONIA 315 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0617 Prci-Chr1 6327661 6333882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0617 37 676 Receptor kinase-like Gene Family AT1G25390 42.879 8.21e-156 462
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Prci1g0617 Pkinase 3.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0617 - - qsa:O6P43_005636 694.501