Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0614 ATGAATCCTTCTCTTGCCCCATGTTCCCTCTTCTTCCTTCTTCTCCTAATTTTCATCGTAACCATTAGAGCCGATGATAGATCCACAAACTGCAGTAGCCGGTTCAGCTGTGGAACCGTCAACAACGTTGGATATCCATTCTGGGGAGAAAACAGAGCAGAATACTGTGGTCAGCCTGGTTTCCAACTTGCTTGCCAAGACAATACTCCAAAGCTGATCTTCAACGCTGTCACTTATCGGATTCTCAAGTTCAACTTGAGTGATAAGAGTCTCACTGTGGCTAGGGATGATTACTGGCAAACTCTATGTCCAAATCAGTACTTAAACACTAGCTTTGATAACACCTCTTTCAAGCTTGCCGATGGGTTTCAAGACATTGCCTTGCTATATGATTGCCTCAAGAGTTTCAATTCAGCGGGTCAATTCACCACTTCATCTAAGGCAGAGTGTTCGAAGCAAAAGGTGTACTACGGGAGCTTATCTACTTACAGTATTGATCTGACAGGAATTTGCAAGGTCGTTGTTGTTCCTATAACGAGTGCCAATGTTAATTTGATATTTTCCGATGAAAAGGAAATTGAAGACGCAATAAAAGATGGTTTTGAGATAGGATGGAGTGTTAACAAGGAAGAGTGCAGCAACTGCGTCAACTCTGGGGGGCACTGCGGGTATATTAATAATAAGTTCAATTGTTTTTGCAGCAATGGGCGTCAAGGAACGTGTTATGCAGGATCATCTTCGAATGGAGATCAGATTGTTATTGCAATTGCATCTGCCGGTGGTGTTGGGATAGTGATAGTCTTGATTGTGATAATCTGTTATCGTCATGGAAGATTAAGAAAAAATGTCAGAACATACCATGATCACCATGTTGAGACATTCATGGAAAATTATGGCACTTTGGCACCGAAAAAATACACTTATTCAGAAGTGAAAAGAATCACAAAGTCATTCACAACGAAAATAGGTCAGGGAGGTTATGGAATTGTCTACAAAGCGACCATGCCTGAAGGTCGTCTTGTGGCAGTAAAAGTACTAAGCGAGACTAAGAGCACCGGAGAAGAATTCATAAATGAAGTTGCAAGTATTAGTAAAACATCACATGTGAATATAGTTTCTTTGTTGGGATTTTGTTATGAGAAGAACAAAAGAGCATTGATATATGAATTCATGCCCAATGGCTCATTGGACAAGTTCATCTATAAAGGAGAATATTCCTTGAATCCAATTTGCGATTGTGAATGGATGAGATTATACCGAATCGCAATCGGTATTGCTCAAGGTTTAGAGTACTTGCATCAAGGATGTAATACAAGAATCCTACATCTCGACATCAAGCCACAAAATATTTTGTTAGATGAAGATTTTTGTCCAAAAATATCTGATTTTGGGCTTGCAAAAACATGCCATAAAAAGGAAAGTATTGTATCAATATTAGGTATGAGAGGAACTGCAGGATACATTGCACCAGAAGTTTTCAGTCGCACATATGGTAGAGTATCATACAAATCTGATGTTTATAGCTATGGCATGTTAGTCCTTGAAATGATTGGAGGAAGAAAGAATTTTGATAATCAAGCGTCACATACCAGTGATATATACTTTCCCAATTGGATCTATAAAGAACTTGAGCAATCCAATGTTGTTGCAACAGATATGTCCATCTCAAAAGAGGAAAATGAAGTGGTAAGAAAGCTGACTTTGGTTGGTTTATGGTGTATTCAGACAAATCCAATAGACAGGCCATCAATGAGTAAAGTGGTTGAGATGTTAGAAGGATCCAGTGAATCATTGTCATTCCCACCAAAACCTTCTCTCTATTCTCCTCCAAGGCCACCCCTTCATTTTTCAGATGTCTCTTCCAGCATTACACTTGATTCAAATTCCGTGCCAAGTGGATGA 1902 0.3933 MNPSLAPCSLFFLLLLIFIVTIRADDRSTNCSSRFSCGTVNNVGYPFWGENRAEYCGQPGFQLACQDNTPKLIFNAVTYRILKFNLSDKSLTVARDDYWQTLCPNQYLNTSFDNTSFKLADGFQDIALLYDCLKSFNSAGQFTTSSKAECSKQKVYYGSLSTYSIDLTGICKVVVVPITSANVNLIFSDEKEIEDAIKDGFEIGWSVNKEECSNCVNSGGHCGYINNKFNCFCSNGRQGTCYAGSSSNGDQIVIAIASAGGVGIVIVLIVIICYRHGRLRKNVRTYHDHHVETFMENYGTLAPKKYTYSEVKRITKSFTTKIGQGGYGIVYKATMPEGRLVAVKVLSETKSTGEEFINEVASISKTSHVNIVSLLGFCYEKNKRALIYEFMPNGSLDKFIYKGEYSLNPICDCEWMRLYRIAIGIAQGLEYLHQGCNTRILHLDIKPQNILLDEDFCPKISDFGLAKTCHKKESIVSILGMRGTAGYIAPEVFSRTYGRVSYKSDVYSYGMLVLEMIGGRKNFDNQASHTSDIYFPNWIYKELEQSNVVATDMSISKEENEVVRKLTLVGLWCIQTNPIDRPSMSKVVEMLEGSSESLSFPPKPSLYSPPRPPLHFSDVSSSITLDSNSVPSG 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0614 633 CDD STKc_IRAK 322 593 - -
Prci1g0614 633 MobiDBLite consensus disorder prediction 596 633 - -
Prci1g0614 633 ProSitePatterns Protein kinases ATP-binding region signature. 322 344 IPR017441 GO:0005524
Prci1g0614 633 SUPERFAMILY Protein kinase-like (PK-like) 295 592 IPR011009 -
Prci1g0614 633 Pfam Protein kinase domain 320 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g0614 633 MobiDBLite consensus disorder prediction 615 633 - -
Prci1g0614 633 Gene3D Transferase(Phosphotransferase) domain 1 391 600 - -
Prci1g0614 633 ProSiteProfiles Protein kinase domain profile. 316 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g0614 633 FunFam S-receptor-like serine/threonine-protein kinase 285 390 - -
Prci1g0614 633 PANTHER RUST RESISTANCE KINASE LR10-RELATED 289 608 IPR045874 GO:0004672
Prci1g0614 633 Gene3D Phosphorylase Kinase; domain 1 289 390 - -
Prci1g0614 633 Pfam Wall-associated receptor kinase galacturonan-binding 31 95 IPR025287 GO:0030247
Prci1g0614 633 ProSitePatterns Serine/Threonine protein kinases active-site signature. 440 452 IPR008271 GO:0004672|GO:0006468
Prci1g0614 633 Pfam Wall-associated receptor kinase C-terminal 161 235 IPR032872 -
Prci1g0614 633 SMART serkin_6 316 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g0614 633 FunFam PR5-like receptor kinase 391 602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0614 Prci-Chr1 6280338 6285183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0614 9 617 Receptor kinase-like Gene Family AT1G66910 42.547 1.71e-158 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Prci1g0614 Pkinase 3.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0614 - - aprc:113862598 653.669