Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0602 ATGGCAGCTGAGATCGGGGCCGGCGCTGCAACGAAGTGTACTGAAGTATTGCTAGATAAAGTGATGAAGGAACTTCAATATCTGTGTTGTTACAAGAGTTATGCCGCTGACTATGAACAGAAAAAATTAGAATTGTCAGCCATGGTGAGGAGTGTGGACATAAAGATAGAAGAAGCCAAGACAAGAAACGAGACTCAAATTGACCCTATGGTTGAGCACTGGGTTCGAAGAGCCAAACAACTTATTGGACGAGAAACAAGACCAAAAAAATGGTTTGGTTTCTGTACTGATTGCTTTTCCCAATGTTCATTGGCCATGGAATTAGAGAGCATGACGCAGGAGATTCCAACAATAGTGGAGAAAGTCGAGAACTTCTCTCAAGTTGCTCATGCAGCTAAACATCCAGGCATGGAATTCTATTCCCAAGAGTTCATGCATTTTAAAAGTAGAGACTCGAAATTTAAACAGCTTAGGGAGGAATTGAAAGATGGAAATAAATGCAGGATCGCATTGCAAGCAATGGGAGGATCAGGAAAAACAACAATGGCAAAAGAAGTTGGGAAGGAAGTTGAGAATTCAAAGGCATTTGATAAAGTTATCTTTATCGAGGTTCCCAACCCTATTGATGAAAAAAAGATTCGAGATGAGATTGCGAAGAAATTGGATTTGGGGTTAAAAGATGATAAAGAACGCACACATGCAGAACAAATATGGAGTAGAATTGCTAGCGCTGGAAATGTACTCATAATTCTTGATGATGTCTGGAAAGAGCTCAAGCTTGAGAACATAGGGATTCACCATGGCATCCATACCCATGGTCGCTGTTGTATTTTGATAACCACACGTAATGGGACAGTTTGTTCAAGCATGAGATGCCAAAAGACAATTAAACTAGAGGAATTAGCTGAGGAAGATGCGGTGGATCTTTTCTTATCTCATGCTATTGAGAGTGGAAATGATTGTCGTGATAGAGTGAAGGTGCCGGCATCAAAGATTGTGAACAAGTGTGGAAGATTACCTATTATAGTTGTGGCAGTAGCAAAAACCTTAAGAAACCAAGATCCGAAAGAATGGGAGGATGCTTTTGCAGCAACAGAAAAAGATGCATCCTTAAGGTACGGGAATGCTGATGAAGAAGCAAAGAAGTTTTATAATTCTTTGAGATTAAGCTTCAATTATCTAGATGCAAGAGCCCAAGATCTCTTCCTTTTATGTTCTATATTTCCAAGAGCTTATGATATATCAGTAGAGCTTTTAAGCAGAATTGCGATAGGCTCGGGACTTTGTGGAAATGTTGACAGCTACTGTATAGCAAGAAGTCAAGTTCTTTCAATTAAAACCATACTTGTAAGTTCTGCTTTATTGTTGACTGCTCAAGAAGGATATGTGAAGCTGCATGATGTGATTCGTGATGTGGCCCAACAGATAGCGGATGAAAAGGTTCAAGTAATCATGGATTCGGAGACAAAATTGAAGGAGAATGTCAAATATTCATCTTGGATCATAAATGACTTTTCCAACTATTTTGAGGGTAGCAAACTTGAGGTTCTTCTAGTATGGGTAAATGCAAATGGTTCTTTGGAAGTCCCAGATGCATTCTTTGATAGCATGAAGGGACTTAGAGTTTTGCTTTTGTATTCAAGGATAATGTCTGGGAGAACTTTGGCCTCATCACTACCAAAATCAATTCAATCTCTAGAAAATATCCAAACACTGTCTCTAACAAATTGGAAGTTAGGTGATATATCTATTTTGCAAAACCTAAAAAAACTCCAGACACTTGAATTGACTGATTGTTCAATTACCGAACTTCCAACTGATGTCAGCCGACTGGAGAAATTGAGATTGCTAGGCTTGGTACGTTGTTCAGTTGAAAGGAATAATCCATTTGAAGTGATTGGAAGATGCTCCAAGTTAGAAGTATTGTATTATCTTTCAAATGATGTCAATCTTAACATTGATGCAAAGCCTTCTAAAATTACAGTTCTTCAAGAATTTGGAATATATCATATAGAAGGCGAATTCTCTTGGTGTTCTTTTCAATTGGATGGTTCAATAAAAAGATATTTCAATTCAACCACGTTAAAAGGGATCTTGTCTGAAAGCACAGTAAAATCCTTGGCAGCAAGAGCAGAGATTCTTGAGTTAACAGAATGTGATGAAACAAGATGGACAAATCTTATTCCTGATATGATTCATATAGAAGACGGAGGCATGAATGACTTAAGTAGGCTTTGTTTGAGATCTTGGCCTGCAATACAGTGTCTAATTTGTACAAATGACATTCATTCTGATGCAACTATCTTCTCCAATTTAGTTGAGCTGCAACTTCATGATATGCATGTCAGGGAATTATGCCGCGGTGATTATCCTAATGACTTTCTCAAGCAACTTGAGAAGCTAGGCTTAAGTCAATGTGTTGAACTAGAAGGCACATTATTCAAGGGCAAACTAGAGTTGGCTAATCTCAAGTATATAGAAGTAGTGGATTGTTCAATGACTTGTCTTTTCCATCCATCCACAACTCAGAGTCTAAAGCAATTAGAAAATGTATACATAAGAGGATGTTCTAAGCTGGAATGCCTAATAAGTAATGAGGGATTGGCAGAGCTGCAAAAAGTGAATGATCATCAAGATCCAAATCAAAAGAACTATCATTCAATTTTCTCAAGATTGAAGTTTCTGGAGGTTAGAGAATGTCATGGATTAAAATTTATATTGCCAACTTGTTCTTGTAAAGAGCTAGAAAGTATGAAAATCTATGAGTGTAATGAGCTAAAATACATATTTGGGCAATGTCCTGAGGAGGGAGGACTGTATCAAATGGAAAAAGAAATCATGCTCCCTATACTAAAAGGAATAAAAATTGCAAACACACCGAAATTCATCAACATATATGCAGAATGTTATCTCCCACAGCCTTCCCAAGTGAAGAAATCATGGGGCAATCTATGCTATTTTTTGCCAAAATCAAGTGCCTTAAGTAGAGATGACCCAGCTTTGTCCGAGTCCATACAACCGGACCATACACAGGCATCAAAGGAGAAGAATGTTGTGAATAGAGCATATGGCCTTTTTACACCGCCATTCTACCCATATAAAAATTTGAGAAAGATGAGGATAGAGGGATTTTCTGAGTTAAAGTCACTCTTTAATCTATCCGTTGCCTCATCATTGAATTTGCTCGAAAAATTGGAAGTAATAAGCTGCAATGCAATGGAGCAGATAGTGATAGACGAGTGGCATGGTCATTATCACATGAATGGCAGCTCTACTGGCTCTATCTTTCCCAACTTACAGCGGATCAAAGTCAGCGAGGCTGAAAAGTTGAAATATGTGTTCGGACAACGTCACCCCAATCAGAAGCATAATGTTCATATGGAACTTAATCTCCCAGCTTTCAAGGAACTGTACCTTGATGATGTCCCAAATATGATTAGTATTTGCTCCGAAAACTATTATGTGAAGGCATTATCTCTACAAGGAACTAGTTTGGAAAAATGCCCCCAACTTCCCTTAAAAACTATTATAGATCTATCAGTTGATGTACGAAAAAGACCAGATCTCTCAAGGATAAAGGCATCAAAGGCGAAGTCTATTCCCAGTACAACTCATGAATATTTCACACCAACTTCATATCACTGCAATTTGAGAGAGATTGAGATAACTGGATCTTCTGACTTAACATCACTCTTTACCCTATCCATTGCCTCATCACTAAAATTGTTGGAAAGATTGGAAGTCAAGGAGTGCAATGCATTGGAGCACATAGTAACTGACGAGGGGCATGGTCATGATCATATAAATGGCAGCTCTGTCTTTCCCAAATTACAACGTGTTATTGTTGATAGTTGTAACCATTTGGAATATATATTTCCAGCTTTTTATTCGAAAGACTTAAAGGATTTGGAATATGTGGACATTGCAAAAGCTGAAAGGTTGAAATATGTGTTCGGAAAATGTCATGCTGATCAAAATCATAGTGATCAGATTGAACTTAATCTCCCTGCTCTAAAAAATCTATACCTTATTGATGTACCCAATATGGTTCATATTTGCACTGAAAACTATCATGTGAAAGCATTATATGTAGAATGTATCAGTTTGGAAGGATGTGCACAACTTCTCATACGAACTCTTACAGATTTCTTGGAAGGTGGACATAAAAGACAAGATTTCTCAAGGAAAAAGGCATTATCTCTCAAGGAGAAAGGTAAGCCTCTTTCTGACAAGCAAGAGGTGACTGATTTTAGGGATAAAAGCATGGGGCCTAAAAGTTATCTGAGCTTTCGAAATCTCTCCACGCTAGAAATGGAAGGATGCAAACGATTGAAATTTATATTGTCTGCATCTACCTCAAGAAGCATGCCAAAATTGAGATGCCTCATCGTATCAAACTGTGGAGAGCTAGTTAGCATCATTGAGGATGAAGAGAATGAAATAAGCAGAGAATGTTTCCCAGAGCTAAGTAAAATTGAAGTAAGGCATTGCAAGAAGTTGAGATGCATATTGTCTATGTCCAAATGTGGCAAGCTTCCACAACTCATGATCTTGATCATAGAAGATGCCCCTGAGCTTGGGCAAGTATTTGGATGGGAGCAGGGCATGCCAAAAGAGCTCATGAAGGATGTGCTTCCAAGGCTATTTGCATTGAAGCTGATAAATCTACCAAGTCTTCATACTATCTGTCAAGGAATTGATTTTCAAAATGTGAAAATCCGTCTTGTGCAAAAGTGTCCCAATGTTACTTTAACTTCAGCTAATGCCAGCTCCAGTGAATTATATGATGTTTATATGACATTACGAAATGATCAGACAAACTTTGCTGATGAAGGCTACCCCTGCAGATATGACATTCTTCACTGGGCTATCAAGAGAGAAGAAGAAGAAAAAGAATCAAAGGAAGCTCTTGAGAGAGAGAAGACAATATCAGAACAGAACAATAGTTCTCCAGAACCAGCAAATAGTGAACAGACATCCAAGGAGGTTACTGAAAATGACCCCACGATACACAAGCAGAACTACTGTTCTGAGACTGAAGAAAAAGGATCGCCAGAGGATCTCAGAAAAGACTCAACAATGCCAAATCAGAACGATGATGATTCACCAAATTTGGCAGATAGTGAAGAAACATCAAAGGAGATTGTTGAAAAAGACTCCACTGCACACAAACAGAACAGTGATATGCTAAATATGGCGAAGAATACTGATGCTTCAACAAATGAATTTGTTGAACAACAGCTTTCTAGTTCACATACAGCGGCAACTTCATCTAATTTAGATATGGAAAGATTGGAGCTAAGTGTTCAAAAAGGTTCGAAATTAGATGGAGCTATCAAAGAAAATCAAATCATGAATTCAAAATCAAGCAATGCATCACCAACAGCATCTATAACTCCACGGGGAAATAAATCTCCACATGAAGCTGAAGCAACTATAGGAGAAGGTCTTTCATCTGAGAAACATGACACAAGTAAGGAGAAAGTAGATGCAAGTGTTCATGGAAGTCCAAAATTAGAGGAAGCAGGAATATCAAATGAAGTCAAGGATTCAGAACACAGAGCCATGCCAGCACCATTTGCTAGTCCTTTACAAGTTGAAACTGCACAAGAAACAGTGGAGGAGACAAGCGTTCTAAAAAGTCAAAACTCAGAGGAGGCTGTGTTGGCAGATGAAGTCATGGATTCGAAGCTTAGCAACATACCCTCACCGTTTTCTAGTCCTTTTCAAATTGAATCTCCACAAATTGCTAAGGAAACAATGGAGCCAAGTGTTCGAGAAGGTTCTAAATTAGATGAAGCTGGCAAAACTGATCAAATCATGCATTCAGATTTAAACAACACAGTCCCAACAAAATCCGTTGTTCCTCCAGAAAATAAATCTCCGCATGTTAATTTGGTTCACAAAGTAAGTCCATCAACTAATACACAAATGATCTCTCAATGGGTCCCTTCAATCTCTGCTCATGACAAGCCTCAAATAGAAACTGCAACTACTCCCTTAGAACTAGAGAGCTCACATTCAGACCTACCAGATATTTCAGCAACTACTGAATCGGCACAAGATGAGACTTGGACTGATGAAGAAAATAAGTTTGGCAAGAAGTCTGAACAATATGAAGAACATGATCACATGAGATTATTCCAAATAACAAAGGAAGGTGCTGATATGGAAGTCTACATGCCTTATGTTCATAAAGTCATTGCTGATCTTCAACATCATGATGAGGTGGCTAAGGCCCTTGCTGACTTGGTAGCCTCATTGAAGATGGGTTTAAATGAAATAGCTACCTCAGAAGAAAACAGACTTGGCCTTGAGAAAGCTCTCACCATCTTGTCCTCATATTGTTCTGAAGATGGACCTCCCTCTCATAGCCTTTTTCAAGATGCAATAGACTCTATGCATCATGAAATCCAAAGTATTTTTTCTTCCTTCAACCAAGCTTATGACACCATGGAGACATTCACCAAGCTTCAAAAAAAAGAGAAGCTTATGATTGAACAACACTCACAACGAAAAGAAGCTGCCGCTGCCACTTTATCTGAAATTTGCAGGACTGAGAATTCAATGGTTGAAGCTCAACTAAAGGAAGCAGAGCTAAATGAGCATATCTCTAAGTTACAGGCTGAACTGGATAGCAAGAAAAAGGAAATTGAGGAGTTTAAGATCAAATTGTTGTATCTTGAAGAGCAAGACAAGAAGAGTGCTTCTGATGACATAAGATTCATAATGGAGTTTGAGGAAGTGAAGAAAGAGGTGTCAGGCATGGTTGAAACACAAATGAAAGCAAGGAAACAACTGGAAAATATGGACATCAAGTGGTCTTCCTGTTTATCCAATTTTATGAAAACCACACTACTGTTGGGAATTCATCTTAAACAAAAACTCTGA 6891 0.3834 MAAEIGAGAATKCTEVLLDKVMKELQYLCCYKSYAADYEQKKLELSAMVRSVDIKIEEAKTRNETQIDPMVEHWVRRAKQLIGRETRPKKWFGFCTDCFSQCSLAMELESMTQEIPTIVEKVENFSQVAHAAKHPGMEFYSQEFMHFKSRDSKFKQLREELKDGNKCRIALQAMGGSGKTTMAKEVGKEVENSKAFDKVIFIEVPNPIDEKKIRDEIAKKLDLGLKDDKERTHAEQIWSRIASAGNVLIILDDVWKELKLENIGIHHGIHTHGRCCILITTRNGTVCSSMRCQKTIKLEELAEEDAVDLFLSHAIESGNDCRDRVKVPASKIVNKCGRLPIIVVAVAKTLRNQDPKEWEDAFAATEKDASLRYGNADEEAKKFYNSLRLSFNYLDARAQDLFLLCSIFPRAYDISVELLSRIAIGSGLCGNVDSYCIARSQVLSIKTILVSSALLLTAQEGYVKLHDVIRDVAQQIADEKVQVIMDSETKLKENVKYSSWIINDFSNYFEGSKLEVLLVWVNANGSLEVPDAFFDSMKGLRVLLLYSRIMSGRTLASSLPKSIQSLENIQTLSLTNWKLGDISILQNLKKLQTLELTDCSITELPTDVSRLEKLRLLGLVRCSVERNNPFEVIGRCSKLEVLYYLSNDVNLNIDAKPSKITVLQEFGIYHIEGEFSWCSFQLDGSIKRYFNSTTLKGILSESTVKSLAARAEILELTECDETRWTNLIPDMIHIEDGGMNDLSRLCLRSWPAIQCLICTNDIHSDATIFSNLVELQLHDMHVRELCRGDYPNDFLKQLEKLGLSQCVELEGTLFKGKLELANLKYIEVVDCSMTCLFHPSTTQSLKQLENVYIRGCSKLECLISNEGLAELQKVNDHQDPNQKNYHSIFSRLKFLEVRECHGLKFILPTCSCKELESMKIYECNELKYIFGQCPEEGGLYQMEKEIMLPILKGIKIANTPKFINIYAECYLPQPSQVKKSWGNLCYFLPKSSALSRDDPALSESIQPDHTQASKEKNVVNRAYGLFTPPFYPYKNLRKMRIEGFSELKSLFNLSVASSLNLLEKLEVISCNAMEQIVIDEWHGHYHMNGSSTGSIFPNLQRIKVSEAEKLKYVFGQRHPNQKHNVHMELNLPAFKELYLDDVPNMISICSENYYVKALSLQGTSLEKCPQLPLKTIIDLSVDVRKRPDLSRIKASKAKSIPSTTHEYFTPTSYHCNLREIEITGSSDLTSLFTLSIASSLKLLERLEVKECNALEHIVTDEGHGHDHINGSSVFPKLQRVIVDSCNHLEYIFPAFYSKDLKDLEYVDIAKAERLKYVFGKCHADQNHSDQIELNLPALKNLYLIDVPNMVHICTENYHVKALYVECISLEGCAQLLIRTLTDFLEGGHKRQDFSRKKALSLKEKGKPLSDKQEVTDFRDKSMGPKSYLSFRNLSTLEMEGCKRLKFILSASTSRSMPKLRCLIVSNCGELVSIIEDEENEISRECFPELSKIEVRHCKKLRCILSMSKCGKLPQLMILIIEDAPELGQVFGWEQGMPKELMKDVLPRLFALKLINLPSLHTICQGIDFQNVKIRLVQKCPNVTLTSANASSSELYDVYMTLRNDQTNFADEGYPCRYDILHWAIKREEEEKESKEALEREKTISEQNNSSPEPANSEQTSKEVTENDPTIHKQNYCSETEEKGSPEDLRKDSTMPNQNDDDSPNLADSEETSKEIVEKDSTAHKQNSDMLNMAKNTDASTNEFVEQQLSSSHTAATSSNLDMERLELSVQKGSKLDGAIKENQIMNSKSSNASPTASITPRGNKSPHEAEATIGEGLSSEKHDTSKEKVDASVHGSPKLEEAGISNEVKDSEHRAMPAPFASPLQVETAQETVEETSVLKSQNSEEAVLADEVMDSKLSNIPSPFSSPFQIESPQIAKETMEPSVREGSKLDEAGKTDQIMHSDLNNTVPTKSVVPPENKSPHVNLVHKVSPSTNTQMISQWVPSISAHDKPQIETATTPLELESSHSDLPDISATTESAQDETWTDEENKFGKKSEQYEEHDHMRLFQITKEGADMEVYMPYVHKVIADLQHHDEVAKALADLVASLKMGLNEIATSEENRLGLEKALTILSSYCSEDGPPSHSLFQDAIDSMHHEIQSIFSSFNQAYDTMETFTKLQKKEKLMIEQHSQRKEAAAATLSEICRTENSMVEAQLKEAELNEHISKLQAELDSKKKEIEEFKIKLLYLEEQDKKSASDDIRFIMEFEEVKKEVSGMVETQMKARKQLENMDIKWSSCLSNFMKTTLLLGIHLKQKL 2296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0602 2296 SUPERFAMILY RNI-like 1184 1530 - -
Prci1g0602 2296 MobiDBLite consensus disorder prediction 1780 1802 - -
Prci1g0602 2296 MobiDBLite consensus disorder prediction 1899 1962 - -
Prci1g0602 2296 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 137 405 IPR027417 -
Prci1g0602 2296 Gene3D - 300 389 IPR042197 -
Prci1g0602 2296 MobiDBLite consensus disorder prediction 1643 1663 - -
Prci1g0602 2296 Coils Coil 2190 2231 - -
Prci1g0602 2296 MobiDBLite consensus disorder prediction 1725 1761 - -
Prci1g0602 2296 MobiDBLite consensus disorder prediction 1899 1914 - -
Prci1g0602 2296 MobiDBLite consensus disorder prediction 1999 2021 - -
Prci1g0602 2296 MobiDBLite consensus disorder prediction 1865 1884 - -
Prci1g0602 2296 MobiDBLite consensus disorder prediction 1776 1885 - -
Prci1g0602 2296 Coils Coil 1626 1647 - -
Prci1g0602 2296 Gene3D - 390 473 IPR036388 -
Prci1g0602 2296 Pfam NB-ARC domain 155 392 IPR002182 GO:0043531
Prci1g0602 2296 MobiDBLite consensus disorder prediction 1923 1939 - -
Prci1g0602 2296 SUPERFAMILY RNI-like 534 860 - -
Prci1g0602 2296 Gene3D Ribonuclease Inhibitor 474 663 IPR032675 -
Prci1g0602 2296 MobiDBLite consensus disorder prediction 1664 1696 - -
Prci1g0602 2296 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1083 1318 - -
Prci1g0602 2296 Gene3D Ribonuclease Inhibitor 714 937 IPR032675 -
Prci1g0602 2296 Gene3D Ribonuclease Inhibitor 1129 1331 IPR032675 -
Prci1g0602 2296 Gene3D Ribonuclease Inhibitor 1420 1593 IPR032675 -
Prci1g0602 2296 Gene3D - 137 299 IPR027417 -
Prci1g0602 2296 PRINTS Disease resistance protein signature 586 602 - -
Prci1g0602 2296 PRINTS Disease resistance protein signature 336 350 - -
Prci1g0602 2296 PRINTS Disease resistance protein signature 168 183 - -
Prci1g0602 2296 PRINTS Disease resistance protein signature 241 255 - -
Prci1g0602 2296 MobiDBLite consensus disorder prediction 1999 2028 - -
Prci1g0602 2296 MobiDBLite consensus disorder prediction 1706 1724 - -
Prci1g0602 2296 MobiDBLite consensus disorder prediction 1940 1955 - -
Prci1g0602 2296 MobiDBLite consensus disorder prediction 1814 1835 - -
Prci1g0602 2296 MobiDBLite consensus disorder prediction 1633 1761 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0602 Prci-Chr1 6041604 6071806 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0602 169 596 WRKY Transcription Factor Family AT5G45050 23.163 4.07e-09 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0602 - - pcin:129311690 4528.78