Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0601 ATGGCAGCTGAGATCGGGGCCGGCGCTGCAACGAAGTGTACTGAAGTATTGCTAGATAAAGTGATGAAGGAACTTCAATATCTGTGTTGTTACAAGAGTTATGCCGCTGACTATGAACAGAAAAAATTAGAATTGTCAGCCATGGTGAGGAGTGTGGACATAAAGATAGAAGAAGCCAAGACAAGAAACGAGACTCAAATTGACCCTATGGTTGAGCACTGGGTTCGAAGAGCCAAACAACTTATTGGACGAGAAACAAGACCAAAAAAATGGTTTGGTTTCTGTACTGATTGCTTTTCCCAATGTTCATTGGCCATGGAATTAGAGAGCATGACGCAGGAGATTCCAACAATAGTGGAGAAAGTCGAGAACTTCTCTCAAGTTGCTCATGCAGCTAAACATCCAGGCATGGAATTCTATTCCCAAGAGTTCATGCATTTTAAAAGTAGAGACTCGAAATTTAAACAGCTTAGGGAGGAATTGAAAGATGGAAATAAATGCAGGATCGCATTGCAAGCAATGGGAGGATCAGGAAAAACAACAATGGCAAAAGAAGTTGGGAAGGAAGTTGAGAATTCAAAGGCATTTGATAAAGTTATCTTTATCGAGGTTCCCAACCCTATTGATGAAAAAAAGATTCGAGATGAGATTGCGAAGAAATTGGATTTGGGGTTAAAAGATGATAAAGAACGCACACATGCAGAACAAATATGGAGTAGAATTGCTAGCGCTGGAAATGTACTCATAATTCTTGATGATGTCTGGAAAGAGCTCAAGCTTGAGAACATAGGGATTCACCATGGCATCCATACCCATGGTCGCTGTTGTATTTTGATAACCACACGTAATGGGACAGTTTGTTCAAGCATGAGATGCCAAAAGACAATTAAACTAGAGGAATTAGCTGAGGAAGATGCGGTGGATCTTTTCTTATCTCATGCTATTGAGAGTGGAAATGATTGTCGTGATAGAGTGAAGGTGCCGGCATCAAAGATTGTGAACAAGTGTGGAAGATTACCTATTATAGTTGTGGCAGTAGCAAAAACCTTAAGAAACCAAGATCCGAAAGAATGGGAGGATGCTTTTGCAGCAACAGAAAAAGATGCATCCTTAAGGTACGGGAATGCTGATGAAGAAGCAAAGAAGTTTTATAATTCTTTGAGATTAAGCTTCAATTATCTAGATGCAAGAGCCCAAGATCTCTTCCTTTTATGTTCTATATTTCCAAGAGCTTATGATATATCAGTAGAGCTTTTAAGCAGAATTGCGATAGGCTCGGGACTTTGTGGAAATGTTGACAGCTACTGTATAGCAAGAAGTCAAGTTCTTTCAATTAAAACCATACTTGTAAGTTCTGCTTTATTGTTGACTGCTCAAGAAGGATATGTGAAGCTGCATGATGTGATTCGTGATGTGGCCCAACAGATAGCGGATGAAAAGGTTCAAGTAATCATGGATTCGGAGACAAAATTGAAGGAGAATGTCAAATATTCATCTTGGATCATAAATGACTTTTCCAACTATTTTGAGGGTAGCAAACTTGAGGTTCTTCTAGTATGGGTAAATGCAAATGGTTCTTTGGAAGTCCCAGATGCATTCTTTGATAGCATGAAGGGACTTAGAGTTTTGCTTTTGTATTCAAGGATAATGTCTGGGAGAACTTTGGCCTCATCACTACCAAAATCAATTCAATCTCTAGAAAATATCCAAACACTGTCTCTAACAAATTGGAAGTTAGGTGATATATCTATTTTGCAAAACCTAAAAAAACTCCAGACACTTGAATTGACTGATTGTTCAATTACCGAACTTCCAACTGATGTCAGCCGACTGGAGAAATTGAGATTGCTAGGCTTGGTACGTTGTTCAGTTGAAAGGAATAATCCATTTGAAGTGATTGGAAGATGCTCCAAGTTAGAAGTATTGTATTATCTTTCAAATGATGTCAATCTTAACATTGATGCAAAGCCTTCTAAAATTACAGTTCTTCAAGAATTTGGAATATATCATATAGAAGGCGAATTCTCTTGGTGTTCTTTTCAATTGGATGGTTCAATAAAAAGATATTTCAATTCAACCACGTTAAAAGGGATCTTGTCTGAAAGCACAGTAAAATCCTTGGCAGCAAGAGCAGAGATTCTTGAGTTAACAGAATGTGATGAAACAAGATGGACAAATCTTATTCCTGATATGATTCATATAGAAGACGGAGGCATGAATGACTTAAGTAGGCTTTGTTTGAGATCTTGGCCTGCAATACAGTGTCTAATTTGTACAAATGACATTCATTCTGATGCAACTATCTTCTCCAATTTAGTTGAGCTGCAACTTCATGATATGCATGTCAGGGAATTATGCCGCGGTGATTATCCTAATGACTTTCTCAAGCAACTTGAGAAGCTAGGCTTAAGTCAATGTGTTGAACTAGAAGGCACATTATTCAAGGGCAAACTAGAGTTGGCTAATCTCAAGTATATAGAAGTAGTGGATTGTTCAATGACTTGTCTTTTCCATCCATCCACAACTCAGAGTCTAAAGCAATTAGAAAATGTATACATAAGAGGATGTTCTAAGCTGGAATGCCTAATAAGTAATGAGGGATTGGCAGAGCTGCAAAAAGTGAATGATCATCAAGATCCAAATCAAAAGAACTATCATTCAATTTTCTCAAGATTGAAGTTTCTGGAGGTTAGAGAATGTCATGGATTAAAATTTATATTGCCAACTTGTTCTTGTAAAGAGCTAGAAAGTATGAAAATCTATGAGTGTAATGAGCTAAAATACATATTTGGGCAATGTCCTGAGGAGGGAGGACTGTATCAAATGGAAAAAGAAATCATGCTCCCTATACTAAAAGGAATAAAAATTGCAAACACACCGAAATTCATCAACATATATGCAGAATGTTATCTCCCACAGCCTTCCCAAGTGAAGAAATCATGGGGCAATCTATGCTATTTTTTGCCAAAATCAAGTGCCTTAAGTAGAGATGACCCAGCTTTGTCCGAGTCCATACAACCGGACCATACACAGGCATCAAAGGAGAAGAATGTTGTGAATAGAGCATATGGCCTTTTTACACCGCCATTCTACCCATATAAAAATTTGAGAAAGATGAGGATAGAGGGATTTTCTGAGTTAAAGTCACTCTTTAATCTATCCGTTGCCTCATCATTGAATTTGCTCGAAAAATTGGAAGTAATAAGCTGCAATGCAATGGAGCAGATAGTGATAGACGAGTGGCATGGTCATTATCACATGAATGGCAGCTCTACTGGCTCTATCTTTCCCAACTTACAGCGGATCAAAGTCAGCGAGGCTGAAAAGTTGAAATATGTGTTCGGACAACGTCACCCCAATCAGAAGCATAATGTTCATATGGAACTTAATCTCCCAGCTTTCAAGGAACTGTACCTTGATGATGTCCCAAATATGATTAGTATTTGCTCCGAAAACTATTATGTGAAGGCATTATCTCTACAAGGAACTAGTTTGGAAAAATGCCCCCAACTTCCCTTAAAAACTATTATAGATCTATCAGTTGATGTACGAAAAAGACCAGATCTCTCAAGGATAAAGGCATCAAAGGCGAAGTCTATTCCCAGTACAACTCATGAATATTTCACACCAACTTCATATCACTGCAATTTGAGAGAGATTGAGATAACTGGATCTTCTGACTTAACATCACTCTTTACCCTATCCATTGCCTCATCACTAAAATTGTTGGAAAGATTGGAAGTCAAGGAGTGCAATGCATTGGAGCACATAGTAACTGACGAGGGGCATGGTCATGATCATATAAATGGCAGCTCTGTCTTTCCCAAATTACAACGTGTTATTGTTGATAGTTGTAACCATTTGGAATATATATTTCCAGCTTTTTATTCGAAAGACTTAAAGGATTTGGAATATGTGGACATTGCAAAAGCTGAAAGGTTGAAATATGTGTTCGGAAAATGTCATGCTGATCAAAATCATAGTGATCAGATTGAACTTAATCTCCCTGCTCTAAAAAATCTATACCTTATTGATGTACCCAATATGGTTCATATTTGCACTGAAAACTATCATGTGAAAGCATTATATGTAGAATGTATCAGTTTGGAAGGATGTGCACAACTTCTCATACGAACTCTTACAGATTTCTTGGAAGGTGGACATAAAAGACAAGATTTCTCAAGGAAAAAGGCATTATCTCTCAAGGAGAAAGGTAAGCCTCTTTCTGACAAGCAAGAGGTGACTGATTTTAGGGATAAAAGCATGGGGCCTAAAAGTTATCTGAGCTTTCGAAATCTCTCCACGCTAGAAATGGAAGGATGCAAACGATTGAAATTTATATTGTCTGCATCTACCTCAAGAAGCATGCCAAAATTGAGATGCCTCATCGTATCAAACTGTGGAGAGCTAGTTAGCATCATTGAGGATGAAGAGAATGAAATAAGCAGAGAATGTTTCCCAGAGCTAAGTAAAATTGAAGTAAGGCATTGCAAGAAGTTGAGATGCATATTGTCTATGTCCAAATGTGGCAAGCTTCCACAACTCATGATCTTGATCATAGAAGATGCCCCTGAGCTTGGGCAAGTATTTGGATGGGAGCAGGGCATGCCAAAAGAGCTCATGAAGGATGTGCTTCCAAGGCTATTTGCATTGAAGCTGATAAATCTACCAAGTCTTCATACTATCTGTCAAGGAATTGATTTTCAAAATGTGAAAATCCGTCTTGTGCAAAAGTGTCCCAATGTTACTTTAACTTCAGCTAATGCCAGCTCCAGTGAATTATATGATGTTTATATGACATTACGAAATGATCAGACAAACTTTGCTGATGAAGGCTACCCCTGCAGATATGACATTCTTCACTGGGCTATCAAGAGAGAAGAAGAAGAAAAAGAATCAAAGGAAGCTCTTGAGAGAGAGAAGACAATATCAGAACAGAACAATAGTTCTCCAGAACCAGCAAATAGTGAACAGACATCCAAGGAGGTTACTGAAAATGACCCCACGATACACAAGCAGAACTACTGTTCTGAGACTGAAGAAAAAGGATCGCCAGAGGATCTCAGAAAAGACTCAACAATGCCAAATCAGAACGATGATGATTCACCAAATTTGGCAGATAATACTGATGCTTCAACAAATGAATTTGTTGAACAACAGCTTTCTAGTTCACATACAGCGGCAACTTCATCTAATTTAGATATGGAAAGATTGGAGCTAAGTGTTCAAAAAGGTTCGAAATTAGATGGAGCTATCAAAGAAAATCAAATCATGAATTCAAAATCAAGCAATGCATCACCAACAGCATCTATAACTCCACGGGGAAATAAATCTCCACATGAAGCTGAAGCAACTATAGGAGAAGGTCTTTCATCTGAGAAACATGACACAAGTAAGGAGAAAGTAGATGCAAGTGTTCATGGAAGTCCAAAATTAGAGGAAGCAGGAATATCAAATGAAGTCAAGGATTCAGAACACAGAGCCATGCCAGCACCATTTGCTAGTCCTTTACAAGTTGAAACTGCACAAGAAACAGTGGAGGAGACAAGCGTTCTAAAAAGTCAAAACTCAGAGGAGGCTGTGTTGGCAGATGAAGTCATGGATTCGAAGCTTAGCAACATACCCTCACCGTTTTCTAGTCCTTTTCAAATTGAATCTCCACAAATTGCTAAGGAAACAATGGAGCCAAGTGTTCGAGAAGGTTCTAAATTAGATGAAGCTGGCAAAACTGATCAAATCATGCATTCAGATTTAAACAACACAGTCCCAACAAAATCCGTTGTTCCTCCAGAAAATAAATCTCCGCATGTTAATTTGGTTCACAAAGTAAGTCCATCAACTAATACACAAATGATCTCTCAATGGGTCCCTTCAATCTCTGCTCATGACAAGCCTCAAATAGAAACTGCAACTACTCCCTTAGAACTAGAGAGCTCACATTCAGACCTACCAGATATTTCAGCAACTACTGAATCGGCACAAGATGAGACTTGGACTGATGAAGAAAATAAGTTTGGCAAGAAGTCTGAACAATATGAAGAACATGATCACATGAGATTATTCCAAATAACAAAGGAAGGTGCTGATATGGAAGTCTACATGCCTTATGTTCATAAAGTCATTGCTGATCTTCAACATCATGATGAGGTGGCTAAGGCCCTTGCTGACTTGGTAGCCTCATTGAAGATGGGTTTAAATGAAATAGCTACCTCAGAAGAAAACAGACTTGGCCTTGAGAAAGCTCTCACCATCTTGTCCTCATATTGTTCTGAAGATGGACCTCCCTCTCATAGCCTTTTTCAAGATGCAATAGACTCTATGCATCATGAAATCCAAAGTATTTTTTCTTCCTTCAACCAAGCTTATGACACCATGGAGACATTCACCAAGCTTCAAAAAAAAGAGAAGCTTATGATTGAACAACACTCACAACGAAAAGAAGCTGCCGCTGCCACTTTATCTGAAATTTGCAGGACTGAGAATTCAATGGTTGAAGCTCAACTAAAGGAAGCAGAGCTAAATGAGCATATCTCTAAGTTACAGGCTGAACTGGATAGCAAGAAAAAGGAAATTGAGGAGTTTAAGATCAAATTGTTGTATCTTGAAGAGCAAGACAAGAAGAGTGCTTCTGATGACATAAGATTCATAATGGAGTTTGAGGAAGTGAAGAAAGAGGTGTCAGGCATGGTTGAAACACAAATGAAAGCAAGGAAACAACTGGAAAATATGGACATCAAGTGGTCTTCCTGTTTATCCAATTTTATGAAAACCACACTACTGTTGGGAATTCATCTTAAACAAAAACTCTGA 6810 0.3834 MAAEIGAGAATKCTEVLLDKVMKELQYLCCYKSYAADYEQKKLELSAMVRSVDIKIEEAKTRNETQIDPMVEHWVRRAKQLIGRETRPKKWFGFCTDCFSQCSLAMELESMTQEIPTIVEKVENFSQVAHAAKHPGMEFYSQEFMHFKSRDSKFKQLREELKDGNKCRIALQAMGGSGKTTMAKEVGKEVENSKAFDKVIFIEVPNPIDEKKIRDEIAKKLDLGLKDDKERTHAEQIWSRIASAGNVLIILDDVWKELKLENIGIHHGIHTHGRCCILITTRNGTVCSSMRCQKTIKLEELAEEDAVDLFLSHAIESGNDCRDRVKVPASKIVNKCGRLPIIVVAVAKTLRNQDPKEWEDAFAATEKDASLRYGNADEEAKKFYNSLRLSFNYLDARAQDLFLLCSIFPRAYDISVELLSRIAIGSGLCGNVDSYCIARSQVLSIKTILVSSALLLTAQEGYVKLHDVIRDVAQQIADEKVQVIMDSETKLKENVKYSSWIINDFSNYFEGSKLEVLLVWVNANGSLEVPDAFFDSMKGLRVLLLYSRIMSGRTLASSLPKSIQSLENIQTLSLTNWKLGDISILQNLKKLQTLELTDCSITELPTDVSRLEKLRLLGLVRCSVERNNPFEVIGRCSKLEVLYYLSNDVNLNIDAKPSKITVLQEFGIYHIEGEFSWCSFQLDGSIKRYFNSTTLKGILSESTVKSLAARAEILELTECDETRWTNLIPDMIHIEDGGMNDLSRLCLRSWPAIQCLICTNDIHSDATIFSNLVELQLHDMHVRELCRGDYPNDFLKQLEKLGLSQCVELEGTLFKGKLELANLKYIEVVDCSMTCLFHPSTTQSLKQLENVYIRGCSKLECLISNEGLAELQKVNDHQDPNQKNYHSIFSRLKFLEVRECHGLKFILPTCSCKELESMKIYECNELKYIFGQCPEEGGLYQMEKEIMLPILKGIKIANTPKFINIYAECYLPQPSQVKKSWGNLCYFLPKSSALSRDDPALSESIQPDHTQASKEKNVVNRAYGLFTPPFYPYKNLRKMRIEGFSELKSLFNLSVASSLNLLEKLEVISCNAMEQIVIDEWHGHYHMNGSSTGSIFPNLQRIKVSEAEKLKYVFGQRHPNQKHNVHMELNLPAFKELYLDDVPNMISICSENYYVKALSLQGTSLEKCPQLPLKTIIDLSVDVRKRPDLSRIKASKAKSIPSTTHEYFTPTSYHCNLREIEITGSSDLTSLFTLSIASSLKLLERLEVKECNALEHIVTDEGHGHDHINGSSVFPKLQRVIVDSCNHLEYIFPAFYSKDLKDLEYVDIAKAERLKYVFGKCHADQNHSDQIELNLPALKNLYLIDVPNMVHICTENYHVKALYVECISLEGCAQLLIRTLTDFLEGGHKRQDFSRKKALSLKEKGKPLSDKQEVTDFRDKSMGPKSYLSFRNLSTLEMEGCKRLKFILSASTSRSMPKLRCLIVSNCGELVSIIEDEENEISRECFPELSKIEVRHCKKLRCILSMSKCGKLPQLMILIIEDAPELGQVFGWEQGMPKELMKDVLPRLFALKLINLPSLHTICQGIDFQNVKIRLVQKCPNVTLTSANASSSELYDVYMTLRNDQTNFADEGYPCRYDILHWAIKREEEEKESKEALEREKTISEQNNSSPEPANSEQTSKEVTENDPTIHKQNYCSETEEKGSPEDLRKDSTMPNQNDDDSPNLADNTDASTNEFVEQQLSSSHTAATSSNLDMERLELSVQKGSKLDGAIKENQIMNSKSSNASPTASITPRGNKSPHEAEATIGEGLSSEKHDTSKEKVDASVHGSPKLEEAGISNEVKDSEHRAMPAPFASPLQVETAQETVEETSVLKSQNSEEAVLADEVMDSKLSNIPSPFSSPFQIESPQIAKETMEPSVREGSKLDEAGKTDQIMHSDLNNTVPTKSVVPPENKSPHVNLVHKVSPSTNTQMISQWVPSISAHDKPQIETATTPLELESSHSDLPDISATTESAQDETWTDEENKFGKKSEQYEEHDHMRLFQITKEGADMEVYMPYVHKVIADLQHHDEVAKALADLVASLKMGLNEIATSEENRLGLEKALTILSSYCSEDGPPSHSLFQDAIDSMHHEIQSIFSSFNQAYDTMETFTKLQKKEKLMIEQHSQRKEAAAATLSEICRTENSMVEAQLKEAELNEHISKLQAELDSKKKEIEEFKIKLLYLEEQDKKSASDDIRFIMEFEEVKKEVSGMVETQMKARKQLENMDIKWSSCLSNFMKTTLLLGIHLKQKL 2269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0601 2269 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 137 405 IPR027417 -
Prci1g0601 2269 SUPERFAMILY RNI-like 1184 1530 - -
Prci1g0601 2269 Gene3D - 137 299 IPR027417 -
Prci1g0601 2269 Gene3D Ribonuclease Inhibitor 714 937 IPR032675 -
Prci1g0601 2269 Gene3D Ribonuclease Inhibitor 1129 1327 IPR032675 -
Prci1g0601 2269 Gene3D Ribonuclease Inhibitor 1420 1530 IPR032675 -
Prci1g0601 2269 MobiDBLite consensus disorder prediction 1972 1994 - -
Prci1g0601 2269 MobiDBLite consensus disorder prediction 1643 1663 - -
Prci1g0601 2269 Gene3D Ribonuclease Inhibitor 474 663 IPR032675 -
Prci1g0601 2269 Coils Coil 2163 2204 - -
Prci1g0601 2269 Gene3D - 300 389 IPR042197 -
Prci1g0601 2269 MobiDBLite consensus disorder prediction 1753 1775 - -
Prci1g0601 2269 Coils Coil 1626 1647 - -
Prci1g0601 2269 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1083 1318 - -
Prci1g0601 2269 Gene3D - 390 473 IPR036388 -
Prci1g0601 2269 MobiDBLite consensus disorder prediction 1872 1887 - -
Prci1g0601 2269 Pfam NB-ARC domain 155 392 IPR002182 GO:0043531
Prci1g0601 2269 MobiDBLite consensus disorder prediction 1838 1857 - -
Prci1g0601 2269 MobiDBLite consensus disorder prediction 1697 1734 - -
Prci1g0601 2269 MobiDBLite consensus disorder prediction 1633 1734 - -
Prci1g0601 2269 PRINTS Disease resistance protein signature 168 183 - -
Prci1g0601 2269 PRINTS Disease resistance protein signature 336 350 - -
Prci1g0601 2269 PRINTS Disease resistance protein signature 241 255 - -
Prci1g0601 2269 PRINTS Disease resistance protein signature 586 602 - -
Prci1g0601 2269 MobiDBLite consensus disorder prediction 1664 1696 - -
Prci1g0601 2269 MobiDBLite consensus disorder prediction 1787 1808 - -
Prci1g0601 2269 MobiDBLite consensus disorder prediction 1749 1817 - -
Prci1g0601 2269 MobiDBLite consensus disorder prediction 1916 1935 - -
Prci1g0601 2269 MobiDBLite consensus disorder prediction 1832 1858 - -
Prci1g0601 2269 MobiDBLite consensus disorder prediction 1972 2001 - -
Prci1g0601 2269 SUPERFAMILY RNI-like 534 860 - -
Prci1g0601 2269 MobiDBLite consensus disorder prediction 1872 1900 - -
Prci1g0601 2269 Coils Coil 2269 2269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0601 Prci-Chr1 6041604 6071806 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0601 169 596 WRKY Transcription Factor Family AT5G45050 23.163 4.22e-09 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0601 - - pcin:129311690 4462.91