Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0600 ATGGCAGCTGAGATCGGGGCCGGCGCTGCAACGAAGTGTACTGAAGTATTGCTAGATAAAGTGATGAAGGAACTTCAATATCTGTGTTGTTACAAGAGTTATGCCGCTGACTATGAACAGAAAAAATTAGAATTGTCAGCCATGGTGAGGAGTGTGGACATAAAGATAGAAGAAGCCAAGACAAGAAACGAGACTCAAATTGACCCTATGGTTGAGCACTGGGTTCGAAGAGCCAAACAACTTATTGGACGAGAAACAAGACCAAAAAAATGGTTTGGTTTCTGTACTGATTGCTTTTCCCAATGTTCATTGGCCATGGAATTAGAGAGCATGACGCAGGAGATTCCAACAATAGTGGAGAAAGTCGAGAACTTCTCTCAAGTTGCTCATGCAGCTAAACATCCAGGCATGGAATTCTATTCCCAAGAGTTCATGCATTTTAAAAGTAGAGACTCGAAATTTAAACAGCTTAGGGAGGAATTGAAAGATGGAAATAAATGCAGGATCGCATTGCAAGCAATGGGAGGATCAGGAAAAACAACAATGGCAAAAGAAGTTGGGAAGGAAGTTGAGAATTCAAAGGCATTTGATAAAGTTATCTTTATCGAGGTTCCCAACCCTATTGATGAAAAAAAGATTCGAGATGAGATTGCGAAGAAATTGGATTTGGGGTTAAAAGATGATAAAGAACGCACACATGCAGAACAAATATGGAGTAGAATTGCTAGCGCTGGAAATGTACTCATAATTCTTGATGATGTCTGGAAAGAGCTCAAGCTTGAGAACATAGGGATTCACCATGGCATCCATACCCATGGTCGCTGTTGTATTTTGATAACCACACGTAATGGGACAGTTTGTTCAAGCATGAGATGCCAAAAGACAATTAAACTAGAGGAATTAGCTGAGGAAGATGCGGTGGATCTTTTCTTATCTCATGCTATTGAGAGTGGAAATGATTGTCGTGATAGAGTGAAGGTGCCGGCATCAAAGATTGTGAACAAGTGTGGAAGATTACCTATTATAGTTGTGGCAGTAGCAAAAACCTTAAGAAACCAAGATCCGAAAGAATGGGAGGATGCTTTTGCAGCAACAGAAAAAGATGCATCCTTAAGGTACGGGAATGCTGATGAAGAAGCAAAGAAGTTTTATAATTCTTTGAGATTAAGCTTCAATTATCTAGATGCAAGAGCCCAAGATCTCTTCCTTTTATGTTCTATATTTCCAAGAGCTTATGATATATCAGTAGAGCTTTTAAGCAGAATTGCGATAGGCTCGGGACTTTGTGGAAATGTTGACAGCTACTGTATAGCAAGAAGTCAAGTTCTTTCAATTAAAACCATACTTGTAAGTTCTGCTTTATTGTTGACTGCTCAAGAAGGATATGTGAAGCTGCATGATGTGATTCGTGATGTGGCCCAACAGATAGCGGATGAAAAGGTTCAAGTAATCATGGATTCGGAGACAAAATTGAAGGAGAATGTCAAATATTCATCTTGGATCATAAATGACTTTTCCAACTATTTTGAGGGTAGCAAACTTGAGGTTCTTCTAGTATGGGTAAATGCAAATGGTTCTTTGGAAGTCCCAGATGCATTCTTTGATAGCATGAAGGGACTTAGAGTTTTGCTTTTGTATTCAAGGATAATGTCTGGGAGAACTTTGGCCTCATCACTACCAAAATCAATTCAATCTCTAGAAAATATCCAAACACTGTCTCTAACAAATTGGAAGTTAGGTGATATATCTATTTTGCAAAACCTAAAAAAACTCCAGACACTTGAATTGACTGATTGTTCAATTACCGAACTTCCAACTGATGTCAGCCGACTGGAGAAATTGAGATTGCTAGGCTTGGTACGTTGTTCAGTTGAAAGGAATAATCCATTTGAAGTGATTGGAAGATGCTCCAAGTTAGAAGTATTGTATTATCTTTCAAATGATGTCAATCTTAACATTGATGCAAAGCCTTCTAAAATTACAGTTCTTCAAGAATTTGGAATATATCATATAGAAGGCGAATTCTCTTGGTGTTCTTTTCAATTGGATGGTTCAATAAAAAGATATTTCAATTCAACCACGTTAAAAGGGATCTTGTCTGAAAGCACAGTAAAATCCTTGGCAGCAAGAGCAGAGATTCTTGAGTTAACAGAATGTGATGAAACAAGATGGACAAATCTTATTCCTGATATGATTCATATAGAAGACGGAGGCATGAATGACTTAAGTAGGCTTTGTTTGAGATCTTGGCCTGCAATACAGTGTCTAATTTGTACAAATGACATTCATTCTGATGCAACTATCTTCTCCAATTTAGTTGAGCTGCAACTTCATGATATGCATGTCAGGGAATTATGCCGCGGTGATTATCCTAATGACTTTCTCAAGCAACTTGAGAAGCTAGGCTTAAGTCAATGTGTTGAACTAGAAGGCACATTATTCAAGGGCAAACTAGAGTTGGCTAATCTCAAGTATATAGAAGTAGTGGATTGTTCAATGACTTGTCTTTTCCATCCATCCACAACTCAGAGTCTAAAGCAATTAGAAAATGTATACATAAGAGGATGTTCTAAGCTGGAATGCCTAATAAGTAATGAGGGATTGGCAGAGCTGCAAAAAGTGAATGATCATCAAGATCCAAATCAAAAGAACTATCATTCAATTTTCTCAAGATTGAAGTTTCTGGAGGTTAGAGAATGTCATGGATTAAAATTTATATTGCCAACTTGTTCTTGTAAAGAGCTAGAAAGTATGAAAATCTATGAGTGTAATGAGCTAAAATACATATTTGGGCAATGTCCTGAGGAGGGAGGACTGTATCAAATGGAAAAAGAAATCATGCTCCCTATACTAAAAGGAATAAAAATTGCAAACACACCGAAATTCATCAACATATATGCAGAATGTTATCTCCCACAGCCTTCCCAAGTGAAGAAATCATGGGGCAATCTATGCTATTTTTTGCCAAAATCAAGTGCCTTAAGTAGAGATGACCCAGCTTTGTCCGAGTCCATACAACCGGACCATACACAGGCATCAAAGGAGAAGAATGTTGTGAATAGAGCATATGGCCTTTTTACACCGCCATTCTACCCATATAAAAATTTGAGAAAGATGAGGATAGAGGGATTTTCTGAGTTAAAGTCACTCTTTAATCTATCCGTTGCCTCATCATTGAATTTGCTCGAAAAATTGGAAGTAATAAGCTGCAATGCAATGGAGCAGATAGTGATAGACGAGTGGCATGGTCATTATCACATGAATGGCAGCTCTACTGGCTCTATCTTTCCCAACTTACAGCGGATCAAAGTCAGCGAGGCTGAAAAGTTGAAATATGTGTTCGGACAACGTCACCCCAATCAGAAGCATAATGTTCATATGGAACTTAATCTCCCAGCTTTCAAGGAACTGTACCTTGATGATGTCCCAAATATGATTAGTATTTGCTCCGAAAACTATTATGTGAAGGCATTATCTCTACAAGGAACTAGTTTGGAAAAATGCCCCCAACTTCCCTTAAAAACTATTATAGATCTATCAGTTGATGTACGAAAAAGACCAGATCTCTCAAGGATAAAGGCATCAAAGGCGAAGTCTATTCCCAGTACAACTCATGAATATTTCACACCAACTTCATATCACTGCAATTTGAGAGAGATTGAGATAACTGGATCTTCTGACTTAACATCACTCTTTACCCTATCCATTGCCTCATCACTAAAATTGTTGGAAAGATTGGAAGTCAAGGAGTGCAATGCATTGGAGCACATAGTAACTGACGAGGGGCATGGTCATGATCATATAAATGGCAGCTCTGTCTTTCCCAAATTACAACGTGTTATTGTTGATAGTTGTAACCATTTGGAATATATATTTCCAGCTTTTTATTCGAAAGACTTAAAGGATTTGGAATATGTGGACATTGCAAAAGCTGAAAGGTTGAAATATGTGTTCGGAAAATGTCATGCTGATCAAAATCATAGTGATCAGATTGAACTTAATCTCCCTGCTCTAAAAAATCTATACCTTATTGATGTACCCAATATGGTTCATATTTGCACTGAAAACTATCATGTGAAAGCATTATATGTAGAATGTATCAGTTTGGAAGGATGTGCACAACTTCTCATACGAACTCTTACAGATTTCTTGGAAGGTGGACATAAAAGACAAGATTTCTCAAGGAAAAAGGCATTATCTCTCAAGGAGAAAGGTAAGCCTCTTTCTGACAAGCAAGAGGTGACTGATTTTAGGGATAAAAGCATGGGGCCTAAAAGTTATCTGAGCTTTCGAAATCTCTCCACGCTAGAAATGGAAGGATGCAAACGATTGAAATTTATATTGTCTGCATCTACCTCAAGAAGCATGCCAAAATTGAGATGCCTCATCGTATCAAACTGTGGAGAGCTAGTTAGCATCATTGAGGATGAAGAGAATGAAATAAGCAGAGAATGTTTCCCAGAGCTAAGTAAAATTGAAGTAAGGCATTGCAAGAAGTTGAGATGCATATTGTCTATGTCCAAATGTGGCAAGCTTCCACAACTCATGATCTTGATCATAGAAGATGCCCCTGAGCTTGGGCAAGTATTTGGATGGGAGCAGGGCATGCCAAAAGAGCTCATGAAGGATGTGCTTCCAAGGCTATTTGCATTGAAGCTGATAAATCTACCAAGTCTTCATACTATCTGTCAAGGAATTGATTTTCAAAATGTGAAAATCCGTCTTGTGCAAAAGTGTCCCAATGTTACTTTAACTTCAGCTAATGCCAGCTCCAGTGAATTATATGATGTTTATATGACATTACGAAATGATCAGACAAACTTTGCTGATGAAGGCTACCCCTGCAGATATGACATTCTTCACTGGGCTATCAAGAGAGAAGAAGAAGAAAAAGAATCAAAGGAAGCTCTTGAGAGAGAGAAGACAATATCAGAACAGAACAATAGTTCTCCAGAACCAGCAAATAGTGAACAGACATCCAAGGAGGTTACTGAAAATGACCCCACGATACACAAGCAGAACTACTGTTCTGAGACTGAAGAAAAAGGATCGCCAGAGGATCTCAGAAAAGACTCAACAATGCCAAATCAGAACGATGATGATTCACCAAATTTGGCAGATGAAAGATTGGAGCTAAGTGTTCAAAAAGGTTCGAAATTAGATGGAGCTATCAAAGAAAATCAAATCATGAATTCAAAATCAAGCAATGCATCACCAACAGCATCTATAACTCCACGGGGAAATAAATCTCCACATGAAGCTGAAGCAACTATAGGAGAAGGTCTTTCATCTGAGAAACATGACACAAGTAAGGAGAAAGTAGATGCAAGTGTTCATGGAAGTCCAAAATTAGAGGAAGCAGGAATATCAAATGAAGTCAAGGATTCAGAACACAGAGCCATGCCAGCACCATTTGCTAGTCCTTTACAAGTTGAAACTGCACAAGAAACAGTGGAGGAGACAAGCGTTCTAAAAAGTCAAAACTCAGAGGAGGCTGTGTTGGCAGATGAAGTCATGGATTCGAAGCTTAGCAACATACCCTCACCGTTTTCTAGTCCTTTTCAAATTGAATCTCCACAAATTGCTAAGGAAACAATGGAGCCAAGTGTTCGAGAAGGTTCTAAATTAGATGAAGCTGGCAAAACTGATCAAATCATGCATTCAGATTTAAACAACACAGTCCCAACAAAATCCGTTGTTCCTCCAGAAAATAAATCTCCGCATGTTAATTTGGTTCACAAAGTAAGTCCATCAACTAATACACAAATGATCTCTCAATGGGTCCCTTCAATCTCTGCTCATGACAAGCCTCAAATAGAAACTGCAACTACTCCCTTAGAACTAGAGAGCTCACATTCAGACCTACCAGATATTTCAGCAACTACTGAATCGGCACAAGATGAGACTTGGACTGATGAAGAAAATAAGTTTGGCAAGAAGTCTGAACAATATGAAGAACATGATCACATGAGATTATTCCAAATAACAAAGGAAGGTGCTGATATGGAAGTCTACATGCCTTATGTTCATAAAGTCATTGCTGATCTTCAACATCATGATGAGGTGGCTAAGGCCCTTGCTGACTTGGTAGCCTCATTGAAGATGGGTTTAAATGAAATAGCTACCTCAGAAGAAAACAGACTTGGCCTTGAGAAAGCTCTCACCATCTTGTCCTCATATTGTTCTGAAGATGGACCTCCCTCTCATAGCCTTTTTCAAGATGCAATAGACTCTATGCATCATGAAATCCAAAGTATTTTTTCTTCCTTCAACCAAGCTTATGACACCATGGAGACATTCACCAAGCTTCAAAAAAAAGAGAAGCTTATGATTGAACAACACTCACAACGAAAAGAAGCTGCCGCTGCCACTTTATCTGAAATTTGCAGGACTGAGAATTCAATGGTTGAAGCTCAACTAAAGGAAGCAGAGCTAAATGAGCATATCTCTAAGTTACAGGCTGAACTGGATAGCAAGAAAAAGGAAATTGAGGAGTTTAAGATCAAATTGTTGTATCTTGAAGAGCAAGACAAGAAGAGTGCTTCTGATGACATAAGATTCATAATGGAGTTTGAGGAAGTGAAGAAAGAGGTGTCAGGCATGGTTGAAACACAAATGAAAGCAAGGAAACAACTGGAAAATATGGACATCAAGTGGTCTTCCTGTTTATCCAATTTTATGAAAACCACACTACTGTTGGGAATTCATCTTAAACAAAAACTCTGA 6726 0.384 MAAEIGAGAATKCTEVLLDKVMKELQYLCCYKSYAADYEQKKLELSAMVRSVDIKIEEAKTRNETQIDPMVEHWVRRAKQLIGRETRPKKWFGFCTDCFSQCSLAMELESMTQEIPTIVEKVENFSQVAHAAKHPGMEFYSQEFMHFKSRDSKFKQLREELKDGNKCRIALQAMGGSGKTTMAKEVGKEVENSKAFDKVIFIEVPNPIDEKKIRDEIAKKLDLGLKDDKERTHAEQIWSRIASAGNVLIILDDVWKELKLENIGIHHGIHTHGRCCILITTRNGTVCSSMRCQKTIKLEELAEEDAVDLFLSHAIESGNDCRDRVKVPASKIVNKCGRLPIIVVAVAKTLRNQDPKEWEDAFAATEKDASLRYGNADEEAKKFYNSLRLSFNYLDARAQDLFLLCSIFPRAYDISVELLSRIAIGSGLCGNVDSYCIARSQVLSIKTILVSSALLLTAQEGYVKLHDVIRDVAQQIADEKVQVIMDSETKLKENVKYSSWIINDFSNYFEGSKLEVLLVWVNANGSLEVPDAFFDSMKGLRVLLLYSRIMSGRTLASSLPKSIQSLENIQTLSLTNWKLGDISILQNLKKLQTLELTDCSITELPTDVSRLEKLRLLGLVRCSVERNNPFEVIGRCSKLEVLYYLSNDVNLNIDAKPSKITVLQEFGIYHIEGEFSWCSFQLDGSIKRYFNSTTLKGILSESTVKSLAARAEILELTECDETRWTNLIPDMIHIEDGGMNDLSRLCLRSWPAIQCLICTNDIHSDATIFSNLVELQLHDMHVRELCRGDYPNDFLKQLEKLGLSQCVELEGTLFKGKLELANLKYIEVVDCSMTCLFHPSTTQSLKQLENVYIRGCSKLECLISNEGLAELQKVNDHQDPNQKNYHSIFSRLKFLEVRECHGLKFILPTCSCKELESMKIYECNELKYIFGQCPEEGGLYQMEKEIMLPILKGIKIANTPKFINIYAECYLPQPSQVKKSWGNLCYFLPKSSALSRDDPALSESIQPDHTQASKEKNVVNRAYGLFTPPFYPYKNLRKMRIEGFSELKSLFNLSVASSLNLLEKLEVISCNAMEQIVIDEWHGHYHMNGSSTGSIFPNLQRIKVSEAEKLKYVFGQRHPNQKHNVHMELNLPAFKELYLDDVPNMISICSENYYVKALSLQGTSLEKCPQLPLKTIIDLSVDVRKRPDLSRIKASKAKSIPSTTHEYFTPTSYHCNLREIEITGSSDLTSLFTLSIASSLKLLERLEVKECNALEHIVTDEGHGHDHINGSSVFPKLQRVIVDSCNHLEYIFPAFYSKDLKDLEYVDIAKAERLKYVFGKCHADQNHSDQIELNLPALKNLYLIDVPNMVHICTENYHVKALYVECISLEGCAQLLIRTLTDFLEGGHKRQDFSRKKALSLKEKGKPLSDKQEVTDFRDKSMGPKSYLSFRNLSTLEMEGCKRLKFILSASTSRSMPKLRCLIVSNCGELVSIIEDEENEISRECFPELSKIEVRHCKKLRCILSMSKCGKLPQLMILIIEDAPELGQVFGWEQGMPKELMKDVLPRLFALKLINLPSLHTICQGIDFQNVKIRLVQKCPNVTLTSANASSSELYDVYMTLRNDQTNFADEGYPCRYDILHWAIKREEEEKESKEALEREKTISEQNNSSPEPANSEQTSKEVTENDPTIHKQNYCSETEEKGSPEDLRKDSTMPNQNDDDSPNLADERLELSVQKGSKLDGAIKENQIMNSKSSNASPTASITPRGNKSPHEAEATIGEGLSSEKHDTSKEKVDASVHGSPKLEEAGISNEVKDSEHRAMPAPFASPLQVETAQETVEETSVLKSQNSEEAVLADEVMDSKLSNIPSPFSSPFQIESPQIAKETMEPSVREGSKLDEAGKTDQIMHSDLNNTVPTKSVVPPENKSPHVNLVHKVSPSTNTQMISQWVPSISAHDKPQIETATTPLELESSHSDLPDISATTESAQDETWTDEENKFGKKSEQYEEHDHMRLFQITKEGADMEVYMPYVHKVIADLQHHDEVAKALADLVASLKMGLNEIATSEENRLGLEKALTILSSYCSEDGPPSHSLFQDAIDSMHHEIQSIFSSFNQAYDTMETFTKLQKKEKLMIEQHSQRKEAAAATLSEICRTENSMVEAQLKEAELNEHISKLQAELDSKKKEIEEFKIKLLYLEEQDKKSASDDIRFIMEFEEVKKEVSGMVETQMKARKQLENMDIKWSSCLSNFMKTTLLLGIHLKQKL 2241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0600 2241 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 137 405 IPR027417 -
Prci1g0600 2241 MobiDBLite consensus disorder prediction 1944 1973 - -
Prci1g0600 2241 Gene3D - 300 389 IPR042197 -
Prci1g0600 2241 MobiDBLite consensus disorder prediction 1643 1663 - -
Prci1g0600 2241 Gene3D Ribonuclease Inhibitor 474 663 IPR032675 -
Prci1g0600 2241 MobiDBLite consensus disorder prediction 1804 1830 - -
Prci1g0600 2241 MobiDBLite consensus disorder prediction 1888 1907 - -
Prci1g0600 2241 MobiDBLite consensus disorder prediction 1844 1872 - -
Prci1g0600 2241 MobiDBLite consensus disorder prediction 1633 1788 - -
Prci1g0600 2241 Pfam NB-ARC domain 155 392 IPR002182 GO:0043531
Prci1g0600 2241 Coils Coil 1626 1647 - -
Prci1g0600 2241 MobiDBLite consensus disorder prediction 1759 1780 - -
Prci1g0600 2241 PRINTS Disease resistance protein signature 168 183 - -
Prci1g0600 2241 PRINTS Disease resistance protein signature 336 350 - -
Prci1g0600 2241 PRINTS Disease resistance protein signature 241 255 - -
Prci1g0600 2241 PRINTS Disease resistance protein signature 586 602 - -
Prci1g0600 2241 Gene3D - 137 299 IPR027417 -
Prci1g0600 2241 Gene3D - 390 473 IPR036388 -
Prci1g0600 2241 MobiDBLite consensus disorder prediction 1944 1966 - -
Prci1g0600 2241 Coils Coil 2135 2176 - -
Prci1g0600 2241 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1083 1318 - -
Prci1g0600 2241 Gene3D Ribonuclease Inhibitor 1420 1530 IPR032675 -
Prci1g0600 2241 Gene3D Ribonuclease Inhibitor 720 939 IPR032675 -
Prci1g0600 2241 Gene3D Ribonuclease Inhibitor 1129 1327 IPR032675 -
Prci1g0600 2241 MobiDBLite consensus disorder prediction 1664 1715 - -
Prci1g0600 2241 MobiDBLite consensus disorder prediction 1725 1747 - -
Prci1g0600 2241 SUPERFAMILY RNI-like 1183 1530 - -
Prci1g0600 2241 MobiDBLite consensus disorder prediction 1810 1829 - -
Prci1g0600 2241 SUPERFAMILY RNI-like 534 860 - -
Prci1g0600 2241 MobiDBLite consensus disorder prediction 1844 1859 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0600 Prci-Chr1 6041604 6071806 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0600 169 596 WRKY Transcription Factor Family AT5G45050 21.951 3.83e-09 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0600 - - pcin:129311690 4071.16