Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0596 ATGGCAGATACTGATTACCATGCTACTAAAAACCCAATAACCGATACCACCTCTCCGACGACGTCGTCTCTGAAGCTTTTTGGCATTAACATTAACAAAGTTTCAGAATCTGAGGCCGCGAACGCCGGCAACGATCGCCGGAAATACGAGTGCCAGTATTGCTGTCGTGAGTTTGCCAATTCACAAGCACTTGGAGGCCATCAAAACGCGCACAAGAAAGAAAGGCAGCTTCTAAAGCGAGCTCAAATGCAAGCTGCTCGTTTGCCTGCAGATCCTTCACGACCCTCTTCCATGGCGCCGGCGTACGGTGGCTTTAACAGCAGCGATGGGGGTGAACGAGGCTTCAGTTTGGATTTGCAACTTCGTCTATGA 372 0.5 MADTDYHATKNPITDTTSPTTSSLKLFGININKVSESEAANAGNDRRKYECQYCCREFANSQALGGHQNAHKKERQLLKRAQMQAARLPADPSRPSSMAPAYGGFNSSDGGERGFSLDLQLRL 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0596 123 ProSitePatterns Zinc finger C2H2 type domain signature. 51 71 IPR013087 -
Prci1g0596 123 Gene3D Classic Zinc Finger 31 98 - -
Prci1g0596 123 MobiDBLite consensus disorder prediction 1 22 - -
Prci1g0596 123 SUPERFAMILY beta-beta-alpha zinc fingers 46 76 IPR036236 -
Prci1g0596 123 MobiDBLite consensus disorder prediction 83 113 - -
Prci1g0596 123 PANTHER ZINC FINGER PROTEIN 5 14 88 IPR044299 GO:0010090
Prci1g0596 123 ProSiteProfiles Zinc finger C2H2 type domain profile. 49 76 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0596 Prci-Chr1 5969343 5970321 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0596 21 87 C2H2 Transcription Factor Family AT1G67030 70.667 8.03e-30 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0596 - - pcin:129303084 192.971