Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0590 ATGGCTACTTGCAAGAATACGGTTGTGTTCATAATGGGATCAACAGGAACAGGAAAAACCAAGCTTTCAATTGACCTAGGGTCACATTTTCCTTCTGAAATCATTAACGCTGACAAGATCCAAGTTTACAGGGGTTTGGACATTATCACCAACAAGATCCCAGAATCTCAGCAACGAGGAATCCCCCACCACCTCCTTGGAATCATCGAAGATCCTGACTTTGACTTTACTCCCACCCATTTCTGTGACCAAGTCATCTCTGCAATCGAACATATAACCAAACAAGGACACATCCCCATTATCGTTGGGGGGTCCAACAATTATCTTGAAGTCCTCGTGGAAGATCACACTTTGGACTTTCGTTCCAAATATGATTGTTGCTTCCTCTGGCTCGATGTATGTCTTGATGTCCTCTTTCCCTATCTAGACAAAAGAGTTGATGAAATGGTGGAAGCAGGATTAGTGGATGAGACTAGAGAGTACTTCGTACCTGGGGCTGACTATGCTATTGGAATCAGAAGAGTCATTGGTGCTCCTGAACTGGACAAGTATTTTAAAGTTGAGAAAGATGCTAATGTTGATGATGCTTATAAGAAAGAGTTGCTCAATGACGCACTTCAGAGAATGAAAGAGAACACTCGTACGCTAGCTCGAGGGCAACTTTCAAAGATACATCGCCTCAATAATGAGCTTGCTTGGGGATTGAATCGAATTGACGCTACTAAGGTATTTGAGGCTGTTTTAAGTGGCAGTGCGTATCAAGTTCTGTGGGAAGATATTGTTTTTAATCCAAGTAAAGGGATTGTTCAGAGATTCCTTGAAGGAAGAACAACATATGAGAGATGGGAAAGCTATACTGAATATTATCATGATTTTGGCTTCAGAAAAAATAATTAG 897 0.4125 MATCKNTVVFIMGSTGTGKTKLSIDLGSHFPSEIINADKIQVYRGLDIITNKIPESQQRGIPHHLLGIIEDPDFDFTPTHFCDQVISAIEHITKQGHIPIIVGGSNNYLEVLVEDHTLDFRSKYDCCFLWLDVCLDVLFPYLDKRVDEMVEAGLVDETREYFVPGADYAIGIRRVIGAPELDKYFKVEKDANVDDAYKKELLNDALQRMKENTRTLARGQLSKIHRLNNELAWGLNRIDATKVFEAVLSGSAYQVLWEDIVFNPSKGIVQRFLEGRTTYERWESYTEYYHDFGFRKNN 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0590 298 Pfam IPP transferase 41 116 - -
Prci1g0590 298 Pfam IPP transferase 121 222 - -
Prci1g0590 298 Gene3D - 5 273 IPR027417 -
Prci1g0590 298 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 160 IPR027417 -
Prci1g0590 298 FunFam Adenylate isopentenyltransferase 5, chloroplastic 135 235 - -
Prci1g0590 298 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 135 235 - -
Prci1g0590 298 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 5 273 IPR039657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0590 Prci-Chr1 5890667 5891563 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0590 122 281 C2H2 Transcription Factor Family AT2G27760 33.514 5.35e-19 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0590 K10760 - gmx:121173984 357.836