Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0589 ATGTTTATGGTTGTCGTGGTGACCCTCTTGGTTATACTCGTCACTCTGTTACTCAGAGTTGCGTATGATACTCTGTTATGCTACATCGTCACCCCCAGACGTATCCAACGCATCATGGAGAAGCAAGGCGTGCGTGGCCCCAAACGCCGCCTCCTCACTGGCAACATCTCCGACATGCTCTCTCTTCACTCCTCCGCCATATCCCAACCCATGAAATCCATCACCCACGACATTGTCTCGCGCCTCCTCCCGCATTTCGCCGCCTGGTACCCCCAATACGGACAGAGGTTTCTGTACTGGAACGGAATAGAGCCTAGGTTGTGTTTGACGGAGACGGAGCTGATCAAGGAGTTTCTGGCCAAGTACAACTCTGTGTCGGGGAGGTCATGGCAGCAACGACAAGGGTCGAAGCATTTCATTGGAGAAGGATTGTTAATGGCGAATGGCCAACAATGGTACCATCAACGTCACATCGTTGCCCCTGCATTCGCAGGAGACAGGCTTAAGGAGTATTCTGGGCACATGGTGGAATGCACGAAGGAGATGCTTCAATCACTGCGAAATGCATTCGAATCAGGCCACACAGAGATTGAGATCAGCGATTACATGACTCGGCTCGCTGCTGATATAATCTCCAGAACAGAGTTCGGTACAAGCTACGAGAAGGGAAAGCAATTATTCCAACTTCTCACTAATCTCCAGACCCATTGTGCTCAAGCAAGTCGTCATCTCTGGTTTCCTGGAAGCCGGTATTTTCCGAGCAGGTATAACAGAGAGACGAAGGCGATGAAGACAAAGGTGGATAGGTTGTTGATGGATATAATTGAGAGCAGGAAGGATTGTGTGGAGATTGGACGGACGAATTCGTATGGGAATGATTTGCTGGGGATACTGTTGGATGAGATGATGATGATGGACAGGGAGAAGAAGATGAAGAAGAGAGGGAATAATGATGGGTTTAGCTTGAATCTGCAGATGATTAAGGATCAATGTAAGACCTTCTTCTTCGCCGGACATGAGACGACGGCGTTGTTGCTGACGTGGACGGTGATGCTGCTCGCCAGCAACCCTGAGTGGCAGGATAGGGTTCGAGCAGAGCTTAAGGAGGTCTGTAATGGCGGAATTCCGGCTCATGAACATCTCTCCAAGCTCACTCTTTTGCATATGGTCATAAATGAGACAATAAGGCTTTATCCTCCGGCAATGGTGCTTCCAAGAATGGCCTTTGAAGATATAACGCTTGGAGACCTTCTCATTCCAAAAGGAGTATCTGTTTGGGTTCCCGTTTTAGCTATCCATCACAGTAAAAAGCTCTGGGGTGAGGATGCGGATGAGTTCAACCCGAACCGGTTTGCTTCCAAGTCATTCTCGTCCGGCCGGTTCATCCCATTCGCGGTCGGACCCAGGAACTGTATTGGGCAAGCTTTTGCTCTCATGGAAGCTAAGATCATATTGGCTATGTTCATCTCTAAATTCAGATTCACTATTTCTGCTAATTATCGTCATGCTCCTGAGATTGTTCTCACCATCAAGCCCAGATATGGCGTTCAAGTTTGTTTGGAGGCCTTGGATAAGTAA 1578 0.4854 MFMVVVVTLLVILVTLLLRVAYDTLLCYIVTPRRIQRIMEKQGVRGPKRRLLTGNISDMLSLHSSAISQPMKSITHDIVSRLLPHFAAWYPQYGQRFLYWNGIEPRLCLTETELIKEFLAKYNSVSGRSWQQRQGSKHFIGEGLLMANGQQWYHQRHIVAPAFAGDRLKEYSGHMVECTKEMLQSLRNAFESGHTEIEISDYMTRLAADIISRTEFGTSYEKGKQLFQLLTNLQTHCAQASRHLWFPGSRYFPSRYNRETKAMKTKVDRLLMDIIESRKDCVEIGRTNSYGNDLLGILLDEMMMMDREKKMKKRGNNDGFSLNLQMIKDQCKTFFFAGHETTALLLTWTVMLLASNPEWQDRVRAELKEVCNGGIPAHEHLSKLTLLHMVINETIRLYPPAMVLPRMAFEDITLGDLLIPKGVSVWVPVLAIHHSKKLWGEDADEFNPNRFASKSFSSGRFIPFAVGPRNCIGQAFALMEAKIILAMFISKFRFTISANYRHAPEIVLTIKPRYGVQVCLEALDK 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0589 525 PRINTS P450 superfamily signature 337 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g0589 525 PRINTS P450 superfamily signature 389 400 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g0589 525 PRINTS P450 superfamily signature 462 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g0589 525 PRINTS P450 superfamily signature 471 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g0589 525 SUPERFAMILY Cytochrome P450 75 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g0589 525 Gene3D Cytochrome P450 28 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g0589 525 PRINTS E-class P450 group I signature 346 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g0589 525 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g0589 525 PRINTS E-class P450 group I signature 206 224 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g0589 525 PRINTS E-class P450 group I signature 326 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g0589 525 PRINTS E-class P450 group I signature 461 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g0589 525 PRINTS E-class P450 group I signature 429 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g0589 525 PRINTS E-class P450 group I signature 471 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g0589 525 Pfam Cytochrome P450 91 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci1g0589 525 PANTHER CYTOCHROME P450 FAMILY MEMBER 27 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0589 Prci-Chr1 5839017 5844456 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0589 1 385 Cytochrome P450 AT5G38450 59.845 1.91e-151 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0589 K10717 - gmx:100808392 787.719