Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0588 ATGCGGATGAGCTGTAATGGATGCCGAGTTTTGAGAAAAGGTTGCAGTGAGAATTGCAGTATCAGGCCTTGTTTGCAGTGGATTAAAAGCCCAGAGTCTCAGGCAAATGCTACTGTGTTTCTCGCCAAGTTCTACGGCCGTGCTGGGCTCATGAACCTCATCAACGCTGGTCCTGAACACCTTCGTCCTGCTATTTTTCGGTCCTTGCTATACGAGGCATGCGGGCGGATAGTGAACCCGATTTATGGGTCCGTCGGGTTGTTATGGTCCGGGAGCTGGCAGCTCTGTCAGGCCGCCGTGGAAGCCGTCTTGAAGGGCGCGCCGATCACTCCGATCACCTCAGAGGCGGCCACCAATGGGAGGGGCCCGCCTCTCAAGGCTTACGACATACGCCACGTGTCCAAGGACGAGAACTCGGCCGCGTCAAACGATGCTCAACGAGTCGTCAAGACTCGCTCGAGGTTCAAGCGCTCTGTCGGCGGCGGCGTCAAGCCGAAAGCCAACAACAACAAAGCAGTAACCGGCTCGTTGTTCGTTGAGCCCGCTCCAGCACGTGACGGCGCTCAAGCAACTACTCCAATCAGTTCGTGGACCGCGTGTTGCGCCACCAAAGCGGTTGTGAACCGGTCGGGGAGTCATGAGTCATCGCTGAGCCATCAGTCGGAGGCAGTGAACGAAAGCAAAGAGAGCGAGAGCATGATCTCCGTGGAGACCGCGGAGACGTCAATCCTCTTCCGAGACGAGCCGGAATCAACCCGGAAAGCCAGCGACCGAACTGTCGATGAAACGGCCGATATAGGATTAGAGTTGACACTAGGGTTCGAACCGGTGTCACGTGCCAATCACGTAGTACCGGTGAAGAAGAGGAGGATCGAGTTCAAGGATAGTGAGAATTGGTCATCTTGCAAAATGGACCTTGGACTTGAATTCTCGGGTTGA 939 0.5559 MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPITSEAATNGRGPPLKAYDIRHVSKDENSAASNDAQRVVKTRSRFKRSVGGGVKPKANNNKAVTGSLFVEPAPARDGAQATTPISSWTACCATKAVVNRSGSHESSLSHQSEAVNESKESESMISVETAETSILFRDEPESTRKASDRTVDETADIGLELTLGFEPVSRANHVVPVKKRRIEFKDSENWSSCKMDLGLEFSG 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0588 312 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 272 - -
Prci1g0588 312 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Prci1g0588 312 PIRSF AS2 1 311 IPR017414 -
Prci1g0588 312 MobiDBLite consensus disorder prediction 136 167 - -
Prci1g0588 312 MobiDBLite consensus disorder prediction 211 233 - -
Prci1g0588 312 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0588 Prci-Chr1 5792971 5794329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0588 1 308 AS2 family AT3G02550 56.869 2.04e-109 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Prci1g0588 LOB 1.1e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0588 - - qsa:O6P43_005610 441.039