Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0580 ATGGCTGCCATATCCTACAGACAAAACCCACACGTCAACAACACTTACCCGCAGAAAGGAGTCATCGCTGAGGAAATCCAAGGACTCATTAGAGTTCACAGAGATGGTTATGTGGAAAGGCCTCAAGTTGTTCCTTGTGTTTCCTGTTCATCGTCACAATCATGTCGTTCTGTGACTTCCAGAGACATCTTCATCAACAAAGACACCGACCTATGGGCACGTTTATATGTCCCTGTAGGCTTCTCTAACACCAATAAGCTTCCTTTGCTAATTTACTTCCACGGTGGTGGCTTCTGTGTTGGCTCTGCGTCTTGGAGCTGCTACCATGAGTTCTTAACCAGTCTCGCTTCGAAAGCAAACTGTATCATTCTCTCTCCGGAATACCATTTAGCCCCAGAAAATCGTCTTCCTTCTGCATATGAAGATGGTTTCAGCACTGTCATGTGGTTGGAACAAGAATCTCTGAACAGCTCTAGCGGGCAAAAATGGTGGCTGAATCAGACCAACCTATCATCTCTTTATCTTGCAGGTGACAGTGCAGGAGCCAACATAGCCTACAATGTTGGTTCACGCATTTCATCAAACACTCGATTGTCACTCAAAGGTATAATCTTGATCCAGCCTTTCTTTGGAGGAGAAGAAAGAACCATGTCAGAGAAGCAATGTTCAGACAAGTTTCTTACTCTATCAGCCTCAGACACCTACTGGAGATTATCGCTTCCTCATGGGGCAAACCGAGACCACCGTTATTGTAACCCTCTGGTTAACGGCGTCACCAAGCTGAGAGACTTGAGGGTTTCAGGTGTTCTGGTGTGTGTATCAGAATTGGATATAATGAAAGACAGAAACTTGCAGCTTTCTGAGGCTTTGGTTAGAGCAGGGAAGAAGGTGGAGACTGTGATGTTCAAAGGCGTGGGCCATGCGTTCCAAATTCTGAATAACTCACATCTTTCACAGACTCGTACCCAGGAAATGATCAGTCACATCAAGAACTTCATCAGCCATTAG 1008 0.4534 MAAISYRQNPHVNNTYPQKGVIAEEIQGLIRVHRDGYVERPQVVPCVSCSSSQSCRSVTSRDIFINKDTDLWARLYVPVGFSNTNKLPLLIYFHGGGFCVGSASWSCYHEFLTSLASKANCIILSPEYHLAPENRLPSAYEDGFSTVMWLEQESLNSSSGQKWWLNQTNLSSLYLAGDSAGANIAYNVGSRISSNTRLSLKGIILIQPFFGGEERTMSEKQCSDKFLTLSASDTYWRLSLPHGANRDHRYCNPLVNGVTKLRDLRVSGVLVCVSELDIMKDRNLQLSEALVRAGKKVETVMFKGVGHAFQILNNSHLSQTRTQEMISHIKNFISH 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0580 335 Pfam alpha/beta hydrolase fold 90 310 IPR013094 GO:0016787
Prci1g0580 335 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 173 185 IPR033140 -
Prci1g0580 335 SUPERFAMILY alpha/beta-Hydrolases 21 333 IPR029058 -
Prci1g0580 335 PANTHER ARYLACETAMIDE DEACETYLASE 26 318 - -
Prci1g0580 335 Gene3D alpha/beta hydrolase 30 334 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0580 Prci-Chr1 5590438 5591906 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0580 1 333 Carbohydrate Esterase AT5G16080 49.425 1.49e-114 334
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0580 - - gmx:100819429 447.973