Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0558 ATGGACTCTCGCCGAGCACCTCGCGCTGTGATTGACCCCAAGGTCCGCCAAGTAGGGTTCTTTGCTCCCGGAGCTCCACCCGAACGCACCCACTCTAGTCCACCCGACCCGTTTTCCCCCAAATCTTCTTCTCCTCTGGTTTCTGATATCTCTCCCTCCGGCAATTCCCTGTCGCCGGTGATGATCCCGCCGCCACGTCATTCGTCCGACAATTTGCTCCTCAACACCCGTCCGGCGGCATTCCCGGCGCCTTCCCCTCTCCGGGGAGATTCCATTGCTGCTGGCAGCTACAACTCTTCATCCGAGTTTTTTCCTGCCCCCATGTCTCCAACCCCTTCCTCTTACTCGAACAAGGCGGTTGCTGAAGGAGATTTGTTTGATGGGATTGCATCGCCGAGCCGTGGAATAAGGGGCCATGCTGGAAAAGGGGCTTCTTCATTTCCTCGGGGAGGTTTTGACTTGACAGCGATGAAGGCTAGCAGTGTGCCGGCTAGTGGATTGACCACGGTCTCGGTTGTGAATGACCCTCTTGGAATTGCGGAGAAAGATAAAGCAGACAAAGGAGGAGGATTGACAGTAGAAGCCAAAGAACAGGCTTCAAGTTCAAAACCCCAGAAGGAAAAACTCACAAGAGCTGAAAGACGTGCTCTTCAAGAAGCTCAACGAGCTGCAAAGGCTGCTGCTAAAGCTGAAGGAAGCAAGGCACCTGGAACAGTGACTTCAGCAAATGCAAAACCTGTTAAAGCTGCAAAGCCTCCTCAAAAGGTTGATAATGCTTCAGTTGCTGCTACTGAGAAAAAGGGATGTGATCGCCCATCAGACAAAGATAGAAAGAAAGATGTTCCTCAACCACGCATGCAGTACGATGATAAGAATCGAGTGGAGAAAGCTAAACGGCGTGCTGTGGTAAAACAAACTGAAACTAGGAACAGAGTTGAGTTGTTCAGACATTTGCCTCAATATGAACATGGGAGTCAGTTGCCAGATCTTGAGGCCAAGTTTTTTCAACTTGATCCCATGCATCATGCTGTCTATAAGGTGGGATTGCAGTATCTGTCTGGTGATATATCTGGTGGCAATGCCCGGTGTATTGCAATGCTTCAAGCATTTCAAGAAGTCATCAAAGACTATAGAGTACCCCCTGAGAAAGCTCTTGCGAGAGACCTAACAGCAAAAATAAGTAGTTATGTTTCATTTTTCATTGCGTGTCGGCCTCTTTCAATCAGCATGGGAAATGCAATTAGATTTCTTAAGAGTCGAATTGCTAAGCTGCCTTTGACTCTGTCAGAGTCAGAAGCCAAAGCTTCTCTTCAGTCAGATATTGATCGCTTTATAAGTGAGAAGATTATCCTTGCCAATAAGGTGATAACCAAACATGCTGTCACAAAAATAAGAGATGGTGATGTTCTCCTTACTTACGGGTCATCGTCTGCAGTCGAGATGATACTGTTACATGCTCATGAACTAGGAAAACAGTTTCGTGTGGTAGTAGTTGACTCTCGTCCAAAGCTTAGCGGTCAACTCTTACTCAGTAGGCTGGCGGCTAAAGGTCTTAGCTGCACTTACACACATATAAATGCTGTTTCCTACATAATGAAAGAAGTTACTCGAGTTTTTCTGGGTGCTTCATCAGTATTGTCTAACGGTACAGTTTACTCTAGAGTTGGGACTGCATGCGTTGCAATGGTTGCTCATGCATTCCGTGTACCTGTCTTGGTGTGTTGTGAGGCTTATAAATTTCACGAAAGGGTGCAGCTTGATTCGATATGCTCAAATGAACTTGGAGATCCAGATGTCATTTCAAAGGTTCAGGGTAGAGAGGATGTCAACTACTTGGATGGTTGGGCCAACACAGGAAATCTGCAACTTCTAAATCTCATTTATGATGCCACGCCTTCAGATTATGTTTCAATGATAGTCACCGATTATGGCATGGTCCCACCCACAAGTGTACCCGTAATTGTAAGAGAATATAGGAGAGAACAATTATGGATATAA 1998 0.4645 MDSRRAPRAVIDPKVRQVGFFAPGAPPERTHSSPPDPFSPKSSSPLVSDISPSGNSLSPVMIPPPRHSSDNLLLNTRPAAFPAPSPLRGDSIAAGSYNSSSEFFPAPMSPTPSSYSNKAVAEGDLFDGIASPSRGIRGHAGKGASSFPRGGFDLTAMKASSVPASGLTTVSVVNDPLGIAEKDKADKGGGLTVEAKEQASSSKPQKEKLTRAERRALQEAQRAAKAAAKAEGSKAPGTVTSANAKPVKAAKPPQKVDNASVAATEKKGCDRPSDKDRKKDVPQPRMQYDDKNRVEKAKRRAVVKQTETRNRVELFRHLPQYEHGSQLPDLEAKFFQLDPMHHAVYKVGLQYLSGDISGGNARCIAMLQAFQEVIKDYRVPPEKALARDLTAKISSYVSFFIACRPLSISMGNAIRFLKSRIAKLPLTLSESEAKASLQSDIDRFISEKIILANKVITKHAVTKIRDGDVLLTYGSSSAVEMILLHAHELGKQFRVVVVDSRPKLSGQLLLSRLAAKGLSCTYTHINAVSYIMKEVTRVFLGASSVLSNGTVYSRVGTACVAMVAHAFRVPVLVCCEAYKFHERVQLDSICSNELGDPDVISKVQGREDVNYLDGWANTGNLQLLNLIYDATPSDYVSMIVTDYGMVPPTSVPVIVREYRREQLWI 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0558 665 MobiDBLite consensus disorder prediction 200 220 - -
Prci1g0558 665 Coils Coil 206 226 - -
Prci1g0558 665 Gene3D - 451 658 IPR042529 -
Prci1g0558 665 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 50 662 - -
Prci1g0558 665 MobiDBLite consensus disorder prediction 267 305 - -
Prci1g0558 665 MobiDBLite consensus disorder prediction 175 305 - -
Prci1g0558 665 MobiDBLite consensus disorder prediction 42 57 - -
Prci1g0558 665 MobiDBLite consensus disorder prediction 1 87 - -
Prci1g0558 665 Pfam Initiation factor 2 subunit family 356 648 IPR000649 GO:0044237
Prci1g0558 665 SUPERFAMILY NagB/RpiA/CoA transferase-like 311 658 IPR037171 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0558 1 665 Eukaryotic Initiation Factors Gene Family AT5G38640 68.336 0.0 840
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0558 K03680 - qsa:O6P43_009261 978.008