Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0536 ATGGGGATCCGATCAATCCGAATCTTAACACTCTCCGTCGTCTTCCTCGCTGTCATCGCCGCCGCCGCCACTGCCATCTCTCCTGGTGATACTCTCTTAGCTTCCAACACAAATCAAAGATGGTCTTCTCCGAACAACACATTCTCCCTTCATTTCCTTCCTTCCAGCCCTCAAACTTCTCCTCCTACCTTCATCGCCGCCATCGTGTATTCCGGCGACACCCCCGTCATCTGGTCCGCTGGTGATGGCTTGGCCGTTGACTCCGGCGGCTCCTTCCGGTTCCTTTCCAACGGAACCCTTCGCCTCGTAAATGGGTCTGGATCAACCGTTTGGAGCTCCGAAACTTCAAATCTGGGTGTCTCCTCCGCTACCCTACAAGACGATGGCAATCTCGTGCTCTCAAACGGAACCGCCACCGTCTGGTCAACGTTCGACCATCCTACCGATACAATTGTTCCTTCTCAGAACTTCACTACCCGTATGGTTCTGCGATCTGGACCGTATTCGTTTCATCTTATTTCAAGTGGAAATTTGACCCTTAAATGGAACGATAGCATATTATACTGGAATCAGGGTTTGAATGCATCTGTGAATGCGGAGTTAAATTCGCCGGTTTTGAGGTTGCAATCAATAGGGCTTTTGCAACTGTATGATTCTAATCTGTCAACTCCAGTTGTTATTGCTTACAGTAGTGACTATGCTGAAGGTAGTGATGTGTTGAGAATTTTGAAGATAGATAGTGATGGGAACTTGAGGATTTACAGTTCTTCAAGAGGTAGTGGAACTGTAAATGCAAGATGGGCTGCTGTAGATCAATGTGAAGTTTATGCTTACTGTGGGAGCTATGGTATTTGCAGTTACAACGATTCAGACCCAATCTGTGGGTGCCCGTCTCAGAATTTTGAGATGATTGATCCGAGTAACAGCCGAAAAGGATGCAGAAGGAAGGTGCATCTTGATGATTGTCCTGGAAGTGCAACTATGTTGCAATTGGAACATGCTCAGTTCTTGACTTATCCGCCTGAGCTGAGTACACAAATATTTTTCATTGGTATATCAGCTTGTAGAGGTAATTGTTTGGCAGGTTCCTGCTTTGCTTCTACTTCGTTATCAGATGGCACAGGACAGTGTTACATAAAATCCTCGGATTTTATCAGTGGGTATCAAAATCCTGCACTGCCTAGCACTTCGTATGTCAAGGTTTGCGGACCAGTGGCTCCAAACCCTCCGGCTTCCTCTGTTGGAGCTGAGAAGAAGCATCGTGGGAGGGTACCAGCTTGGATTGTGGTGTTAGTGGTTTTGGGTACCCTTTTAGCTTTGATTGCCTTTGAAGGTGGTTTGTGGTTCTGGTGCTGTAGGAACAGAACAATATTAGGTGGATTATCTACACAATATGCTCTTCTTGAGTATGCTTCGGGTGCGCCGGTCCAGTTCTCATACAAGGAGCTCCAGCGGGCAACGAAAGGGTTTAAAGAGAAGCTTGGGGCTGGGGGCTTTGGTGCTGTGTATAGAGGAGTCCTTGCTAATAAAACTGTTGTTGCAGTGAAGCAACTTGAGGGCATTGAGCAAGGTGAGAAACAGTTTAGAATGGAAGTAGCTACTATAAGCAGCACTCATCATCTCAACTTAGTGAGGCTGATTGGTTTCTGCTCAGAAGGGCGCCACAGGCTTTTAGTCTATGAGTTCATGAAAAATAGTTCTCTTGATAATCTTCTGTTTGTGACTGAAGAACAGTCGGAAAAACTGTTGAATTGGGAGTATCGGTTCAACATTGCCCTAGGCACTGCAAGGGGCATCACATATCTTCATGAGGAATGTCGAGACTGCATTGTCCACTGTGATATAAAACCTGAAAACATTCTCTTGAATGAAAATTACATTGCCAAAGTCTCAGATTTCGGCCTTGCAAAGCTCGTGAACCCAAAGGACCACAGGCACCGAACTCTGACGAGTGTGAGAGGAACACGAGGATATTTAGCTCCTGAATGGCTTGCCAATCTTCCCATAACTTCCAAGTCTGATGTTTACAGCTATGGTATGGTTTTGTTGGAGATTGTGAGTGGAAGGAGGAACTTTGATGTGCTGGATGACAGAAACAGGAAAAAGTTCTCCAACTGGGCTTATGAAGAGTTTGAGAAAGGCAATATCATGGGAATACTTGACAAAAGACTGAATGACCAAGAAGTTGACATGGAGCAAGTACAAAGAGCAATTCAGGTAAGCTTCTGGTGCATCCAGGAGCATCCATCTCAGAGGCCAACGATGGGTCGAGTCGTGCAAATGCTTGAAGGGATAACCGGGATCGAAAAGCCCCCGGCACCAAAACCCTCTGTCGAAGGATCCGTCAGTGGAACAAGCACGCACTTGAGCAGCAATGCTAGTGCCTTCTCCACCGTTGCAGCCTCAGCCCCAGGTACTGCTTCATCTTCCTCACATCTGAACAGTGGTGTTTCAAGTTTGACTTCAGGAAGGAACACTGAGAAGGCAACTTCCTCTCTTCTACAATCAGACCAGTTATAG 2520 0.4643 MGIRSIRILTLSVVFLAVIAAAATAISPGDTLLASNTNQRWSSPNNTFSLHFLPSSPQTSPPTFIAAIVYSGDTPVIWSAGDGLAVDSGGSFRFLSNGTLRLVNGSGSTVWSSETSNLGVSSATLQDDGNLVLSNGTATVWSTFDHPTDTIVPSQNFTTRMVLRSGPYSFHLISSGNLTLKWNDSILYWNQGLNASVNAELNSPVLRLQSIGLLQLYDSNLSTPVVIAYSSDYAEGSDVLRILKIDSDGNLRIYSSSRGSGTVNARWAAVDQCEVYAYCGSYGICSYNDSDPICGCPSQNFEMIDPSNSRKGCRRKVHLDDCPGSATMLQLEHAQFLTYPPELSTQIFFIGISACRGNCLAGSCFASTSLSDGTGQCYIKSSDFISGYQNPALPSTSYVKVCGPVAPNPPASSVGAEKKHRGRVPAWIVVLVVLGTLLALIAFEGGLWFWCCRNRTILGGLSTQYALLEYASGAPVQFSYKELQRATKGFKEKLGAGGFGAVYRGVLANKTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLIGFCSEGRHRLLVYEFMKNSSLDNLLFVTEEQSEKLLNWEYRFNIALGTARGITYLHEECRDCIVHCDIKPENILLNENYIAKVSDFGLAKLVNPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFDVLDDRNRKKFSNWAYEEFEKGNIMGILDKRLNDQEVDMEQVQRAIQVSFWCIQEHPSQRPTMGRVVQMLEGITGIEKPPAPKPSVEGSVSGTSTHLSSNASAFSTVAASAPGTASSSSHLNSGVSSLTSGRNTEKATSSLLQSDQL 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0536 839 SMART serkin_6 488 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g0536 839 Gene3D - 17 146 IPR036426 -
Prci1g0536 839 SUPERFAMILY Protein kinase-like (PK-like) 470 763 IPR011009 -
Prci1g0536 839 MobiDBLite consensus disorder prediction 767 839 - -
Prci1g0536 839 MobiDBLite consensus disorder prediction 779 839 - -
Prci1g0536 839 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 22 146 - -
Prci1g0536 839 Gene3D Phosphorylase Kinase; domain 1 461 562 - -
Prci1g0536 839 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 192 IPR036426 -
Prci1g0536 839 CDD B_lectin 35 147 IPR001480 -
Prci1g0536 839 ProSiteProfiles Bulb-type lectin domain profile. 17 146 IPR001480 -
Prci1g0536 839 CDD STKc_IRAK 494 765 - -
Prci1g0536 839 Pfam Protein kinase domain 491 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g0536 839 ProSitePatterns Protein kinases ATP-binding region signature. 494 516 IPR017441 GO:0005524
Prci1g0536 839 Gene3D Transferase(Phosphotransferase) domain 1 563 771 - -
Prci1g0536 839 ProSiteProfiles Bulb-type lectin domain profile. 148 266 IPR001480 -
Prci1g0536 839 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 147 269 - -
Prci1g0536 839 Pfam S-locus glycoprotein domain 234 297 IPR000858 GO:0048544
Prci1g0536 839 PANTHER OS07G0415500 PROTEIN 8 774 - -
Prci1g0536 839 PIRSF SRK 3 821 IPR024171 GO:0004674
Prci1g0536 839 FunFam S-receptor-like serine/threonine-protein kinase 462 562 - -
Prci1g0536 839 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 563 772 - -
Prci1g0536 839 Pfam D-mannose binding lectin 87 160 IPR001480 -
Prci1g0536 839 Gene3D - 147 269 IPR036426 -
Prci1g0536 839 ProSitePatterns Serine/Threonine protein kinases active-site signature. 610 622 IPR008271 GO:0004672|GO:0006468
Prci1g0536 839 ProSiteProfiles Protein kinase domain profile. 488 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1g0536 839 SMART blect_4 32 147 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0536 Prci-Chr1 5112891 5116055 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0536 461 772 Receptor kinase-like Gene Family AT5G20050 44.308 1.23e-81 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Prci1g0536 Pkinase 9.3e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0536 - - qsa:O6P43_004111 1266.14