Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0529 ATGGCTGCTTCTTCATCGGGAAATTCCATTTCAACTTCTTCCTCTGCTTTCTCTCACAGACCATTGGAATTCTCCCCCGATTCCCCCCAGAGACCCTCGCTCACCCCCGATCAGGTCAAGTACTGCACCCAAGCGTTGGCCATCCTCAGGGAGAAGCTTCAGACGCCGCACATGATCGCTCAAGAGTTCGCTCAGTTGCAGGCCAATAGGATAACGCCGAGTGAGATGAGGAGAAGATGCATTGTAGCTCTAAATGACGTAAATGCGAGCAAAAATCGGTATAGAGATGTCCTACCATTTGACAAGAACAGAATTGTTCTTGAATCTAGTGCAGATTATAGACCTGCAGCCGAGGGATATATCAATGCAAGCTTTGTCTCGACCTCTTCCTCCGGAAGTATTTCTCAGTTTATAGCTACACAAGGTCCACTACCACATACTTATGAGGATTTCTGGGAAATGGTGATCCAACACCGTTGCCCTGCTGTTGTGATGCTCACTAGGCTTGTTGACCATTATAAGATGGTAAAATGTGGAGATTATTTTCAAGCTGAAGATGGACCTAGAGAGTTAGGCAATATCTCTATTATTAGTAAATGGATGAAAACTACTGAAACATCACTGGTACTGCGCCATTTGGAGGTGAAGCATAGAGAGGAAGAAGAGCTGCCCTTATCTGTTTTGCATATTCAGTATCCTGAATGGCCTGATCATGGAGTTCCTAAAGACACATATGCTGTGCGTGAAATTATGAAAAGATTGTACCATGTACCACCAAACCTTGGCCCAATAGTGGTGCACTGCAGTGCAGGTATTGGCAGAACTGGAACATACTGTGCAATTCACAACACAGTTCAGAGAATCCTTGCTGGTGATATGTCTGCCTTGGATCTTGGTAATACCATAGCTGTCTTCAGGTCGCAGCGTATTGGAATGGTTCAGACACAGGATCAGTACTTTTTCTGCTACAAAGCTATTGCAGAGGAACTGGAAGACCTTGTTTCTCATGATCAATGA 1017 0.4484 MAASSSGNSISTSSSAFSHRPLEFSPDSPQRPSLTPDQVKYCTQALAILREKLQTPHMIAQEFAQLQANRITPSEMRRRCIVALNDVNASKNRYRDVLPFDKNRIVLESSADYRPAAEGYINASFVSTSSSGSISQFIATQGPLPHTYEDFWEMVIQHRCPAVVMLTRLVDHYKMVKCGDYFQAEDGPRELGNISIISKWMKTTETSLVLRHLEVKHREEEELPLSVLHIQYPEWPDHGVPKDTYAVREIMKRLYHVPPNLGPIVVHCSAGIGRTGTYCAIHNTVQRILAGDMSALDLGNTIAVFRSQRIGMVQTQDQYFFCYKAIAEELEDLVSHDQ 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0529 338 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 248 320 IPR000387 GO:0016311|GO:0016791
Prci1g0529 338 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 32 331 IPR029021 -
Prci1g0529 338 Gene3D Protein tyrosine phosphatase superfamily 32 337 IPR029021 -
Prci1g0529 338 ProSiteProfiles PTP type protein phosphatase domain profile. 59 329 IPR000242 GO:0004725|GO:0006470
Prci1g0529 338 SMART ptp_7 226 328 IPR003595 -
Prci1g0529 338 FunFam Tyrosine-protein phosphatase non-receptor type 12 36 337 - -
Prci1g0529 338 Pfam Protein-tyrosine phosphatase 88 328 IPR000242 GO:0004725|GO:0006470
Prci1g0529 338 PRINTS Protein tyrosine phosphatase signature 225 242 IPR000242 GO:0004725|GO:0006470
Prci1g0529 338 PRINTS Protein tyrosine phosphatase signature 263 281 IPR000242 GO:0004725|GO:0006470
Prci1g0529 338 PRINTS Protein tyrosine phosphatase signature 137 157 IPR000242 GO:0004725|GO:0006470
Prci1g0529 338 PRINTS Protein tyrosine phosphatase signature 312 322 IPR000242 GO:0004725|GO:0006470
Prci1g0529 338 PRINTS Protein tyrosine phosphatase signature 119 126 IPR000242 GO:0004725|GO:0006470
Prci1g0529 338 PRINTS Protein tyrosine phosphatase signature 296 311 IPR000242 GO:0004725|GO:0006470
Prci1g0529 338 SMART PTPc_3 58 331 IPR000242 GO:0004725|GO:0006470
Prci1g0529 338 PANTHER RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE 38 332 - -
Prci1g0529 338 MobiDBLite consensus disorder prediction 1 21 - -
Prci1g0529 338 MobiDBLite consensus disorder prediction 1 36 - -
Prci1g0529 338 CDD PTPc_plant_PTP1 120 323 - -
Prci1g0529 338 ProSitePatterns Tyrosine specific protein phosphatases active site. 266 276 IPR016130 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0529 Prci-Chr1 4999090 5005861 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0529 37 335 Protein tyrosine phosphatase (PTP) family AT1G71860 71.237 3.73e-167 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0529 - - qsa:O6P43_004106 530.791