Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0528 ATGACTGCTTCTTTACCCGCCAATTTCTCTCACAAACCCTGGGATCCTTCCCCCGATTCCCCTCCGATAATTTCTCTCACGCCTGATCAGCTCAATCACTGTGCTGAAGCGCTGGCCAGCTTTAGGCAGAGAACGCCGGAGATGATCGATCAAGAGTTCGATCAATTGGAGGCCAATGTGATAACAATAAGTGAGCTGAGGAGAAGATGCACTGTTGCTCTGAATGAAGCAAATCTGGACAAAAATCGGTATCCGGAAAATGTCCTGCCATTTGATGAGAACAGGGTTGTTCTGGAATCAAGTACAGATCCTAGACCCACGGCCATGGGATATATCAATGCAAGCTTTCTCTCGCCCTCCTCCTCTGAAAGTGTTTCTCAGTTTATAGCTACACAAGGTCCACTGCCACATACTTGTGAGGATTTCTGGGAAATGGTAATCCAATACCGCTGCCCCGTCATTGTAAATCTCACTGCGCTTGTTGAACACAACAAGATTGTTAAATGTAGCGATTATTTTCAAGCCGAGGATGGACCTAGAAAGTTTGGTAATATCACTATTGTTTGTGAATGGATGAAAACTACTGAGAAATCATTGGTACTTCGCCATTTGAAGGTGCATAGAAAGGAAGATCTGCCCTTATCTGTTTTGCACATTCATTATCTTGAGTGGCCTGACTATGGAGTTCCCAACGAAACACATGCTGTGCGTGCAATTTTTAAGAGATTGTACCGTTTACCACCGGAACTTGGCCCCATAGTGGTGCACTGCAGTGCAGGTATCGGCAGAACAGGAGCATACTGTGCAGTTCATAATACAATTCAGAGAATTCTTGCTGGAGATAAGTCTGCCTTGGATCTTCGTAATACCATATGTGTCTTCAGGTCACAGCGATATGGAATGGCTCAGAAACAGACCCAGTACAATTTCTGCTATGAAGCTATTGTAGAGGCACTGGACGAGCTTCTTTCTAATCATCAGCAGTAA 987 0.4468 MTASLPANFSHKPWDPSPDSPPIISLTPDQLNHCAEALASFRQRTPEMIDQEFDQLEANVITISELRRRCTVALNEANLDKNRYPENVLPFDENRVVLESSTDPRPTAMGYINASFLSPSSSESVSQFIATQGPLPHTCEDFWEMVIQYRCPVIVNLTALVEHNKIVKCSDYFQAEDGPRKFGNITIVCEWMKTTEKSLVLRHLKVHRKEDLPLSVLHIHYLEWPDYGVPNETHAVRAIFKRLYRLPPELGPIVVHCSAGIGRTGAYCAVHNTIQRILAGDKSALDLRNTICVFRSQRYGMAQKQTQYNFCYEAIVEALDELLSNHQQ 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0528 328 MobiDBLite consensus disorder prediction 1 20 - -
Prci1g0528 328 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 17 320 IPR029021 -
Prci1g0528 328 PANTHER RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE 32 320 - -
Prci1g0528 328 SMART ptp_7 215 317 IPR003595 -
Prci1g0528 328 SMART PTPc_3 48 320 IPR000242 GO:0004725|GO:0006470
Prci1g0528 328 ProSiteProfiles PTP type protein phosphatase domain profile. 49 318 IPR000242 GO:0004725|GO:0006470
Prci1g0528 328 FunFam Tyrosine-protein phosphatase non-receptor type 12 28 326 - -
Prci1g0528 328 Coils Coil 312 328 - -
Prci1g0528 328 PRINTS Protein tyrosine phosphatase signature 252 270 IPR000242 GO:0004725|GO:0006470
Prci1g0528 328 PRINTS Protein tyrosine phosphatase signature 110 117 IPR000242 GO:0004725|GO:0006470
Prci1g0528 328 PRINTS Protein tyrosine phosphatase signature 285 300 IPR000242 GO:0004725|GO:0006470
Prci1g0528 328 PRINTS Protein tyrosine phosphatase signature 128 148 IPR000242 GO:0004725|GO:0006470
Prci1g0528 328 PRINTS Protein tyrosine phosphatase signature 214 231 IPR000242 GO:0004725|GO:0006470
Prci1g0528 328 PRINTS Protein tyrosine phosphatase signature 301 311 IPR000242 GO:0004725|GO:0006470
Prci1g0528 328 Pfam Protein-tyrosine phosphatase 78 317 IPR000242 GO:0004725|GO:0006470
Prci1g0528 328 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 230 309 IPR000387 GO:0016311|GO:0016791
Prci1g0528 328 Gene3D Protein tyrosine phosphatase superfamily 23 325 IPR029021 -
Prci1g0528 328 ProSitePatterns Tyrosine specific protein phosphatases active site. 255 265 IPR016130 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0528 Prci-Chr1 4990022 4996149 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0528 29 325 Protein tyrosine phosphatase (PTP) family AT1G71860 61.462 9.14e-135 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0528 - - qsa:O6P43_004106 416.387