Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0526 ATGGCTGCTTCTGCATCTGCCAATTTCTGTCACAAACCATGGAATCCCTCCCTCGATACCCCTCCGAGAATTTCTGTGACGCCTGATCAGCTCGCTCGCTGCACTGAAGCGATGGCTAGCTTTAGGCAGAAAACGCCGGAGATGATCCGTCAAGAGTACGATCACTTGAAGGCCAGTTTGGATCTAATAGAAGAAAAGGAGCTGGCCGGAAGATGCACTGTTGCTCTAAATGACGCCAATTTAAAAAAAAATCGGTATCCGGAAAATATCCTGCCATTTGACGAGAACAGGGTTGTTCTGGAATCAAGTACAGATGCCAGACCCATGGCCATGGGATTTATCAATATAGCTCCCTCTGAAAGTGTTTCTCAGTTTATAGCCACGCAAGGTCCACTACAACATACTTGTGAGGATTTCTGGGAAATGGTAATCCAATTCCACTGCCCCGTCATTGTGAATCTCACTCGGCTCTTTGAGTATGAAAAGAAAACAGGCAAGGACAAGGAGAAATGTTTCGATTATTTTCAAGCTGAGGAGGGACCTAAAACGTTTGGTAATATCTCTATTGTTTGTGAATGGATGAAAACTACAAAAGAATCATTGGTACTGCGCTATTTGAAGGTCCAAAGAAAGGAAGATCCGCCCTTATATGTTTTGCACATCCATTATCCTGACTGGCCTGACCATGGAGTTCCCGAAGAAACAAATGCTGTGCGTGCAATTTTTAAGAGATTGTACTGTTTACCACCAAAATGTGGCCCAATAGTTGTGCACTGCAGTGCAGGCATTGGCAGAACTGGAACATACTGTGCAGTTCACAATACAATTCAGAGAATCCTTGCCGGCTATAAGTCTGCCTGGGATCTTCATAATACCATATGTGTCTTCAGGTCACAGCGATATGCAATGGCTCGCGAAAAGGATCAGTACTTTTTCTGCTACAAAGCTATTGCAGAGGAACTGAAAGACCTTGTTTCTCATCAGCAATGA 990 0.4414 MAASASANFCHKPWNPSLDTPPRISVTPDQLARCTEAMASFRQKTPEMIRQEYDHLKASLDLIEEKELAGRCTVALNDANLKKNRYPENILPFDENRVVLESSTDARPMAMGFINIAPSESVSQFIATQGPLQHTCEDFWEMVIQFHCPVIVNLTRLFEYEKKTGKDKEKCFDYFQAEEGPKTFGNISIVCEWMKTTKESLVLRYLKVQRKEDPPLYVLHIHYPDWPDHGVPEETNAVRAIFKRLYCLPPKCGPIVVHCSAGIGRTGTYCAVHNTIQRILAGYKSAWDLHNTICVFRSQRYAMAREKDQYFFCYKAIAEELKDLVSHQQ 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0526 329 SMART PTPc_3 48 322 IPR000242 GO:0004725|GO:0006470
Prci1g0526 329 PANTHER RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE 41 323 - -
Prci1g0526 329 ProSitePatterns Tyrosine specific protein phosphatases active site. 257 267 IPR016130 GO:0016311|GO:0016791
Prci1g0526 329 SMART ptp_7 217 319 IPR003595 -
Prci1g0526 329 PRINTS Protein tyrosine phosphatase signature 125 145 IPR000242 GO:0004725|GO:0006470
Prci1g0526 329 PRINTS Protein tyrosine phosphatase signature 287 302 IPR000242 GO:0004725|GO:0006470
Prci1g0526 329 PRINTS Protein tyrosine phosphatase signature 216 233 IPR000242 GO:0004725|GO:0006470
Prci1g0526 329 PRINTS Protein tyrosine phosphatase signature 303 313 IPR000242 GO:0004725|GO:0006470
Prci1g0526 329 PRINTS Protein tyrosine phosphatase signature 254 272 IPR000242 GO:0004725|GO:0006470
Prci1g0526 329 ProSiteProfiles PTP type protein phosphatase domain profile. 49 320 IPR000242 GO:0004725|GO:0006470
Prci1g0526 329 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 16 323 IPR029021 -
Prci1g0526 329 Gene3D Protein tyrosine phosphatase superfamily 26 328 IPR029021 -
Prci1g0526 329 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 232 311 IPR000387 GO:0016311|GO:0016791
Prci1g0526 329 FunFam Tyrosine-protein phosphatase non-receptor type 12 28 328 - -
Prci1g0526 329 Pfam Protein-tyrosine phosphatase 80 319 IPR000242 GO:0004725|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0526 Prci-Chr1 4965648 4973345 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0526 29 326 Protein tyrosine phosphatase (PTP) family AT1G71860 55.700 2.36e-117 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0526 - - qsa:O6P43_004107 384.03