Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0524 ATGGCTGCTTCTGCATCTGCCAATTTCTGTCACAAACCATGGAATCCCTCCCTCGATACCCCTCCGAGAATTTCTGTGACGCCTGATCAGCTCGCTCGCTGCACTGAAGCGATGGCTAGCTTTAGGCAGAAAACGCCGGAGATGATCCGTCAAGAGTACGATCACTTGAAGGCCAGTTTGGATCTAATAGAAGAAAAGGAGCTGGCCGGAAGATGCACTGTTGCTCTAAATGACGCCAATTTAAAAAAAAATCGGTATCCGGAAAATATCCTGCCATTTGACGAGAACAGGGTTGTTCTGGAATCAAGTACAGATGCCAGACCCATGGCCATGGGATTTATCAATGCAAGCTTTCTCTCGATAGCTCCCTCTGAAAGTGTTTCTCAGTTTATAGCCACGCAAGGTCCACTACAACATACTTGTGAGGATTTCTGGGAAATGGTAATCCAATTCCACTGCCCCGTCATTGTGAATCTCACTCGGCTCTTTGAGTATGAAAAGAAAACAGGCAAGGACAAGGAGAAATGTTTCGATTATTTTCAAGCTGAGGAGGGACCTAAAACGTTTGGTAATATCTCTATTGTTTGTGAATGGATGAAAACTACAAAAGAATCATTGGTACTGCGCTATTTGAAGGTCCAAAGAAAGGAAGATCCGCCCTTATATGTTTTGCACATCCATTATCCTGACTGGCCTGACCATGGAGTTCCCGAAGAAACAAATGCTGTGCGTGCAATTTTTAAGAGATTGTACTGTTTACCACCAAAATGTGGCCCAATAGTTGTGCACTGCAGTGCAGGCATTGGCAGAACTGGAACATACTGTGCAGTTCACAATACAATTCAGAGAATCCTTGCCGGCTATAAGTCTGCCTGGGATCTTCATAATACCATATGTGTCTTCAGGTCACAGCGATATGCAATGGCTCGCGAAAAGGATCAGTACTTTTTCTGCTACAAAGCTATTGCAGAGGAACTGAAAGACCTTGTTTCTCATCAGCAATGA 1005 0.4428 MAASASANFCHKPWNPSLDTPPRISVTPDQLARCTEAMASFRQKTPEMIRQEYDHLKASLDLIEEKELAGRCTVALNDANLKKNRYPENILPFDENRVVLESSTDARPMAMGFINASFLSIAPSESVSQFIATQGPLQHTCEDFWEMVIQFHCPVIVNLTRLFEYEKKTGKDKEKCFDYFQAEEGPKTFGNISIVCEWMKTTKESLVLRYLKVQRKEDPPLYVLHIHYPDWPDHGVPEETNAVRAIFKRLYCLPPKCGPIVVHCSAGIGRTGTYCAVHNTIQRILAGYKSAWDLHNTICVFRSQRYAMAREKDQYFFCYKAIAEELKDLVSHQQ 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0524 334 PRINTS Protein tyrosine phosphatase signature 221 238 IPR000242 GO:0004725|GO:0006470
Prci1g0524 334 PRINTS Protein tyrosine phosphatase signature 130 150 IPR000242 GO:0004725|GO:0006470
Prci1g0524 334 PRINTS Protein tyrosine phosphatase signature 308 318 IPR000242 GO:0004725|GO:0006470
Prci1g0524 334 PRINTS Protein tyrosine phosphatase signature 112 119 IPR000242 GO:0004725|GO:0006470
Prci1g0524 334 PRINTS Protein tyrosine phosphatase signature 259 277 IPR000242 GO:0004725|GO:0006470
Prci1g0524 334 PRINTS Protein tyrosine phosphatase signature 292 307 IPR000242 GO:0004725|GO:0006470
Prci1g0524 334 ProSiteProfiles PTP type protein phosphatase domain profile. 49 325 IPR000242 GO:0004725|GO:0006470
Prci1g0524 334 Pfam Protein-tyrosine phosphatase 80 324 IPR000242 GO:0004725|GO:0006470
Prci1g0524 334 ProSitePatterns Tyrosine specific protein phosphatases active site. 262 272 IPR016130 GO:0016311|GO:0016791
Prci1g0524 334 SMART PTPc_3 48 327 IPR000242 GO:0004725|GO:0006470
Prci1g0524 334 PANTHER RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE 41 328 - -
Prci1g0524 334 SMART ptp_7 222 324 IPR003595 -
Prci1g0524 334 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 16 328 IPR029021 -
Prci1g0524 334 Gene3D Protein tyrosine phosphatase superfamily 23 330 IPR029021 -
Prci1g0524 334 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 237 316 IPR000387 GO:0016311|GO:0016791
Prci1g0524 334 FunFam Tyrosine-protein phosphatase non-receptor type 12 28 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0524 Prci-Chr1 4956623 4973346 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0524 29 331 Protein tyrosine phosphatase (PTP) family AT1G71860 56.352 1.89e-121 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0524 - - qsa:O6P43_004107 395.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g0524 1 4956623 4973346 Prci1g0524 1 4956623 4973346 ECH