Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0520 ATGGCTACTAAGCAAGCCGATTTGGTTAATAAGCCTTCTTCTCTGCAGGTTGAGCCTGCTGCCTCTCCGCCGGAGTCTAGTCCTTTTCGGAAAATCGTCGTCGTCGCTTCCATTGCTGCCGGTGTTCAATTCGGATGGGCTCTTCAGCTCTCCTTGTTGACTCCTTATGTACAGCTTCTCGGTATTCCCCATACCTGGGCTGCTTTTATCTGGCTCTGTGGTCCCATCTCTGGGATGGTAGTTCAACCCATCGTCGGATACCACAGTGACCGCTGCACCTCCCGCTTCGGCCGCCGCCGCCCGTTCATCGCTGCTGGTGCACTGGCGGTCGCCATCGCTGTTTTCTTGATCGGTTACGCCGCTGACATGGGACACATGTTCGGCGACTCGCCGGAGAAGAAAACGCGTCCGCGAGCCATCGCGATCTTCGTCGTCGGATTCTGGATCCTCGACGTGGCCAATAACATGCTTCAAGGCCCGTGCCGAGCTCTATTGGCAGACCTCTCCGCCGGCGACCACCGGAAGATGCGGACGGCGAACTCTTTCTTCTCGTTCTTCATGGCCGTCGGGAACGTCCTCGGATACGCCGCCGGATCGTTCAGTAAGCTCTACCACATGTTTCCGTTCACGAAAACGAAGGCCTGCGATGTGTACTGCGCGAACCTGAAGAGCTGCTTCTTCCTCTCCATCGCTCTTCTGCTCGTTCTCGCAACCGCCGCTCTCACCTACGTGAAGGAAAAGGCCCTTGAGAAAAAAACTGGCGGGAACGAGGGTGAAAATGGTTCGGTGGGCGAGGGATCAGGAGGCTTCCAGTGCTTCGGTCAAATGTTCGGGGCGTTCCGTGAGCTCAAGAGGCCGATGTGGATTTTACTCCTGGTGACGTGTCTCAACTGGATTGCTTGGTTCCCTTTCCTGTTGTTCGACACTGATTGGATGGGAAGGGAGGTGTACGGAGGAACGGTGGGGGAAGGTAAGGCGTACGATAAGGGCGTGCGCGCGGGTGCATTGGGTCTAATGATCAACTCGGTGGTGCTGGGCGTGGTGTCCTTGGGCTTGGAGGTGTTGGCGCGTGGGGTTGGGGGTGTGAAGAGGTTGTGGGGCATCGTTAACTTCATTCTCGCCATATGTTTGGCCATGACGGTGCTGATCACCAAGTTGGCCAAGCACTCGCGGCAGTTCGCCCCGGGGTCTACCGATCCTCTGCCACCTTCCACCGGAATTAAGGCCGGAGCGTTAACTCTCTTCGCGGTGCTCGGAATTCCACTGGCGATTACTTACAGTATCCCTTTTGCACTAGCATCCATATTCTCCAGCACTTCAGGCGCAGGCCAAGGGTTATCTTTGGGAGTTCTGAATCTGGCAATTGTCATCCCTCAGATGTTTGTGTCTGTGGTGAGTGGGCCATGGGACCAGGCGTTTGGTGGTGGAAACCTGCCGGCGTTTGTTGTGGGTGCTATCTCTGCCGCAACCAGCGGTATACTATCAATAGTCTTGTTGCCGTCTCCGCCACCGGACCTGGCAAAGACGATGAGCACAGCTGGAGGCTTCCATTAG 1554 0.5631 MATKQADLVNKPSSLQVEPAASPPESSPFRKIVVVASIAAGVQFGWALQLSLLTPYVQLLGIPHTWAAFIWLCGPISGMVVQPIVGYHSDRCTSRFGRRRPFIAAGALAVAIAVFLIGYAADMGHMFGDSPEKKTRPRAIAIFVVGFWILDVANNMLQGPCRALLADLSAGDHRKMRTANSFFSFFMAVGNVLGYAAGSFSKLYHMFPFTKTKACDVYCANLKSCFFLSIALLLVLATAALTYVKEKALEKKTGGNEGENGSVGEGSGGFQCFGQMFGAFRELKRPMWILLLVTCLNWIAWFPFLLFDTDWMGREVYGGTVGEGKAYDKGVRAGALGLMINSVVLGVVSLGLEVLARGVGGVKRLWGIVNFILAICLAMTVLITKLAKHSRQFAPGSTDPLPPSTGIKAGALTLFAVLGIPLAITYSIPFALASIFSSTSGAGQGLSLGVLNLAIVIPQMFVSVVSGPWDQAFGGGNLPAFVVGAISAATSGILSIVLLPSPPPDLAKTMSTAGGFH 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0520 517 PANTHER SUGAR TRANSPORTER 28 498 - -
Prci1g0520 517 FunFam Sucrose transport protein 26 499 - -
Prci1g0520 517 Gene3D MFS general substrate transporter like domains 27 502 IPR036259 -
Prci1g0520 517 Pfam MFS/sugar transport protein 40 248 - -
Prci1g0520 517 CDD MFS_SLC45_SUC 32 494 - -
Prci1g0520 517 SUPERFAMILY MFS general substrate transporter 30 503 IPR036259 -
Prci1g0520 517 NCBIfam sucrose/proton symporter 28 504 IPR005989 GO:0005886|GO:0008515|GO:0015770
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0520 Prci-Chr1 4855747 4859284 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0520 10 517 Sucrose Transporter Gene Family AT1G71890 67.311 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0520 K15378 - gmx:547679 821.617