Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0519 ATGGCTACTAAGCAAAACAACACCAAACCTCCTTCTCTCAATGTTGAACCAGCTTCCTCTCCTCCTGAATCCAGCCCTCTTCGGAAAATCATCGTCGTCGCTTCCATTGCCGCGGGAATCAATTTTGGATGGGCTCTTCAGCTTTCCTTGCTAACTCCCTACGTCCAGCTCCTCGGTACCCCCCACTTTTGGGCCTCCTTTATTTGGCTCTGCGGTCCAGTCTCCGGCTTATTGGTTCAACCAATTGTCGGTTACCACAGCGACCGCTGCACCTCCCGCTTCGGCCGCCGTCGCCCTTTCATCGCAGCCGGAGCACTAGCTGTGGCTGTCGCCGTTTTCTTGATCGGTTACTCCGCTGATCTTGGCCACATGATAGGCGACTCCCTCGAGAAGAAAACAAGACCACGTTCCATCGCTGTCTTCGTCTTCGGATTCTGGATCCTCGACGTCGCCAACAACATGCTCCAAGGCCCGTGCCGAGCTCTATTAGCCGACCTCACCGCCGGGGACCACCGAAAGACACGCACGGCGAACGGATTCTTCTCGTTCTTCATGGCCGTCGGAAACGTGCTGGGATACGCCGCCGGAGCCGACGGCAAGCTGTACAAGAGCTTCGCGTTCACCAAAACCAAAGCCTGCAACGAATACTGCGCCAACCTAAAGAGCTGCTTCTTCATATCCATCGCTCTTCTCACGTTCCTCACAGCCATCGCCATGTTTTACGTGAAGGAGAAGCCACTCCAGTCGCAAAAAGGCGGGAACGAGGGGGATGATTCAGTGGCTGAGGGATCAGGAGGCTTACCATGCTTCGGGCAAATGCTGGGGTCATTCCATGAGCTCAAGAGGCCCATGTGGATTTTACTCGGGGTGACGTGTCTGAACTGGATTGCTTGGTTCCCGTTCTTGATGTTCGACACTGATTGGATGGCGAAGGAGGTGTACGGGGGAAAGGTTGGGGAAGGCAAGGCGTACGATAAGGGGGTGCACGCGGGGTCGTTGGGGCTTATGTTGAACTCGGTGGTGCTTGGTGCGGTGTCGTTGGGCGTGGAGGTGATGGCGCGTGCGGTTGGGGGCGTGAAGAGGCTGTGGGGAATTGTGAACATATTGCTCGCCGCCTGCTTGGCCTCCACCGTGTTGATCACCAAGTTGGCCGAGCACTCACGGCGGTACGCCCCCGGATCCAACGATCCTCTGCCGCCTACCGCCGGAGTTAACGGCGCCGCCTTGTCTCTCTTTGCCTTGCTCGGAATTCCCCTGGCGATTACTTACAGTATTCCTTTTGCACTAGCATCCATTTTCTCCACCACCTCAGGGGCAGGCCAAGGGTTATCTTTAGCAGTTCTCAACCTTGCCATTGTCATCCCACAGATGTTTGTATCCGTTGTTAATGGACCTTGGGATGCGCTCTTTGGTGGCGGCAACTTACCGGCGTTTGTGGCGGGGGCGGTGGCGGCCGCAGCCAGTGGCATATTATCAATGATCTTGTTGCCATCGCCACCGCCGGACTTCAAGCCTGCCGTCGGAGGAGGACTTCATTAA 1539 0.5627 MATKQNNTKPPSLNVEPASSPPESSPLRKIIVVASIAAGINFGWALQLSLLTPYVQLLGTPHFWASFIWLCGPVSGLLVQPIVGYHSDRCTSRFGRRRPFIAAGALAVAVAVFLIGYSADLGHMIGDSLEKKTRPRSIAVFVFGFWILDVANNMLQGPCRALLADLTAGDHRKTRTANGFFSFFMAVGNVLGYAAGADGKLYKSFAFTKTKACNEYCANLKSCFFISIALLTFLTAIAMFYVKEKPLQSQKGGNEGDDSVAEGSGGLPCFGQMLGSFHELKRPMWILLGVTCLNWIAWFPFLMFDTDWMAKEVYGGKVGEGKAYDKGVHAGSLGLMLNSVVLGAVSLGVEVMARAVGGVKRLWGIVNILLAACLASTVLITKLAEHSRRYAPGSNDPLPPTAGVNGAALSLFALLGIPLAITYSIPFALASIFSTTSGAGQGLSLAVLNLAIVIPQMFVSVVNGPWDALFGGGNLPAFVAGAVAAAASGILSMILLPSPPPDFKPAVGGGLH 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0519 512 MobiDBLite consensus disorder prediction 1 21 - -
Prci1g0519 512 FunFam Sucrose transport protein 24 496 - -
Prci1g0519 512 Pfam MFS/sugar transport protein 38 296 - -
Prci1g0519 512 NCBIfam sucrose/proton symporter 26 501 IPR005989 GO:0005886|GO:0008515|GO:0015770
Prci1g0519 512 PANTHER SUGAR TRANSPORTER 26 495 - -
Prci1g0519 512 MobiDBLite consensus disorder prediction 1 25 - -
Prci1g0519 512 Gene3D MFS general substrate transporter like domains 27 252 IPR036259 -
Prci1g0519 512 SUPERFAMILY MFS general substrate transporter 28 500 IPR036259 -
Prci1g0519 512 CDD MFS_SLC45_SUC 30 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0519 Prci-Chr1 4846675 4851232 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0519 23 508 Sucrose Transporter Gene Family AT1G22710 65.455 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0519 K15378 - gmx:547679 762.296