Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0518 ATGGCTTCTCAGCCTTCTTCTCCTCCCGTTCAAACTGATGCCTCGCTGCCGGAGCCAAGCCCTCTGTGGAGAATGGCCGCCGTCGCCTCTATTGCAGCTGGGATTCAATTCGAATGGTCTATTCAGCTCTCCTTGCTAACTCCCTATGTTCAGCTTCTCGGTATTCCACACACTTGGGCTGCTTTTATATGGCTCTGTGGTCCTATCTCCGGTATGTTGGTTCAACCGGTTGCTGGTTACCACAGTGACCGCTGTACTTCCCGGTTCGGCCGCCGCCGCCCGTTTATCGCGGTTGGTGTACTCGCTGTCGTCATCGCCGTTCTCTTGATCGGTTTTGCCGCTGATCTTGGCCACTGGTTCGGGGACTCACTGGATGAGAAAACGCGGCCACGATCTGTCGTTGTCTTCGTCGTCGGATTTTGGATCCTCGACGTGGCCAATAACATGATTCTAGGCCCGAGCCGAGCTCTATTGGCTGACCTCTCCTCCGGCGACCACCGGAAGACGCGGACGGCGAATTCGTTCTTCTCGTTCTTCATGGCCGTCGGAAATGTCCTCGGATACGCCACCGGGTCATCCAGTAAGCTCCACCATATGTTTCCGTCCACGAAAACCAAAGCCTGTGACGTGTACTGCGCGAACCTGAAGAGCTGCTTTTTCGTCTCCATCGCTCTTCTGCTCATTCTCTCAATCGTCGCTCTCACGTCCGCGAAGGAGCTCAGGGCACTTCCGTCACTTGGGAATGACGGAGATGATACGGTGCGTGAGGGATCAGGGAGCTCACGGTATTTCAAACAACCGTTGGGTGATTTTCGGGAGCTCAAGAGGCCGATGTGGATTTTACTCCTGGTGACGTGTCTTAACTGGATTGCTTGGTTCCCCTTTTTGTTTTTCGACACTGATTGGATGGCGAAGGATGTGTACGGGGGAAAGGTTGAGGAAGGTGAGGCGTACGATAAGGGCGTGCGCGCCGGTGCATTGGGTCTTATGCTCAACTCTCTGGTGCTGCTTGTGGCGTCGCTGGGCATGGAGGTGCTGGTGCGTGGGGTTGGAGGTCTGAAGAAGTTATGGGGAATAGTGAATTTCTTGCTCTCTGTGTGCCTGGCCTCGACGGTGTTGGTTACGAAGTTGGCCGAGCGCTCACGGCTGTTAGCCGGCGGCTCCCACGAACCTCCTCCACTGCCGGCCGGTGTCAAGGCCGCCGCCTTGGCGCTATTTGCTGTACTCGGAATTCCCCTGGCGGTTACCTACAGTGTTCCTTTCGCACTAGCATCCATATTCTCCAGCTCCTCCGGAGCAGGTCAAGGATTATCTTTGGGAGTTCTAAACCTTGCCATTGTCATACCACAGTTGGTAGTGTCATTGACAGTCGGACCATGGGATGCATTGTTCGGCGGCGGAAACTTGCCGGGATTTGTGGTGGGCGCCGTCGCAGCTACGATGAGCGGCATATTATCGATTGTCTTTTTGCCGTCTCCGCCAGTGAAGTTGGCCAAGAGAGAGTCGATCACCAGAAAAAATAATTGA 1527 0.5488 MASQPSSPPVQTDASLPEPSPLWRMAAVASIAAGIQFEWSIQLSLLTPYVQLLGIPHTWAAFIWLCGPISGMLVQPVAGYHSDRCTSRFGRRRPFIAVGVLAVVIAVLLIGFAADLGHWFGDSLDEKTRPRSVVVFVVGFWILDVANNMILGPSRALLADLSSGDHRKTRTANSFFSFFMAVGNVLGYATGSSSKLHHMFPSTKTKACDVYCANLKSCFFVSIALLLILSIVALTSAKELRALPSLGNDGDDTVREGSGSSRYFKQPLGDFRELKRPMWILLLVTCLNWIAWFPFLFFDTDWMAKDVYGGKVEEGEAYDKGVRAGALGLMLNSLVLLVASLGMEVLVRGVGGLKKLWGIVNFLLSVCLASTVLVTKLAERSRLLAGGSHEPPPLPAGVKAAALALFAVLGIPLAVTYSVPFALASIFSSSSGAGQGLSLGVLNLAIVIPQLVVSLTVGPWDALFGGGNLPGFVVGAVAATMSGILSIVFLPSPPVKLAKRESITRKNN 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0518 508 CDD MFS_SLC45_SUC 27 485 - -
Prci1g0518 508 NCBIfam sucrose/proton symporter 21 495 IPR005989 GO:0005886|GO:0008515|GO:0015770
Prci1g0518 508 SUPERFAMILY MFS general substrate transporter 25 494 IPR036259 -
Prci1g0518 508 Gene3D MFS general substrate transporter like domains 20 488 IPR036259 -
Prci1g0518 508 PANTHER SUGAR TRANSPORTER 21 489 - -
Prci1g0518 508 Pfam MFS/sugar transport protein 31 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0518 Prci-Chr1 4828411 4832219 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0518 15 494 Sucrose Transporter Gene Family AT1G71890 61.157 0.0 609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0518 K15378 - gmx:547679 681.789