Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0517 ATGGCTTCTCAGCCTTCTTCTCCTCCCGTTCAAACTGATGCCTCGCTGCCGGAGCCAAGCCCTCTGTGGAGAATGGCCGCCGTCGCCTCTATTGCAGCTGGGATTCAATTCGAATGGTCTATTCAGCTCTCCTTGCTAACTCCCTATGTTCAGCTTCTCGGTATTCCACACACTTGGGCTGCTTTTATATGGCTCTGTGGTCCTATCTCCGGTATGTTGGTTCAACCGGTTGCTGGTTACCACAGTGACCGCTGTACTTCCCGGTTCGGCCGCCGCCGCCCGTTTATCGCGGTTGGTGTACTCGCTGTCGTCATCGCCGTTCTCTTGATCGGTTTTGCCGCTGATCTTGGCCACTGGTTCGGGGACTCACTGGATGAGAAAACGCGGCCACGATCTGTCGTTGTCTTCGTCGTCGGATTTTGGATCCTCGACGTGGCCAATAACATGATTCTAGGCCCGAGCCGAGCTCTATTGGCTGACCTCTCCTCCGGCGACCACCGGAAGACGCGGACGGCGAATTCGTTCTTCTCGTTCTTCATGGCCGTCGGAAATGTCCTCGGATACGCCACCGGGTCATCCAGTAAGCTCCACCATATGTTTCCGTCCACGAAAACCAAAGCCTGTGACGTGTACTGCGCGAACCTGAAGAGCTGCTTTTTCGTCTCCATCGCTCTTCTGCTCATTCTCTCAATCGTCGCTCTCACGTCCGCGAAGGAGCTCAGGGCACTTCCGTCACTTGGGAATGACGGAGATGATACGGTGCGTGAGGGATCAGGGAGCTCACGGTATTTCAAACAACCGTTGGGTGATTTTCGGGAGCTCAAGAGGCCGATGTGGATTTTACTCCTGGTGACGTGTCTTAACTGGATTGCTTGGTTCCCCTTTTTGTTTTTCGACACTGATTGGATGGCGAAGGATGTGTACGGGGGAAAGGTTGAGGAAGGTGAGGCGTACGATAAGGGCGTGCGCGCCGGTGCATTGGGTCTTATGCTCAACTCTCTGGTGCTGCTTGTGGCGTCGCTGGGCATGGAGGTGCTGGTGCGTGGGGTTGGAGGTCTGAAGAAGTTATGGGGAATAGTGAATTTCTTGCTCTCTGTGTGCCTGGCCTCGACGGTGTTGGTTACGAAGTTGGCCGAGCGCTCACGGCTGTTAGCCGGCGGCTCCCACGAACCTCCTCCACTGCCGGCCGGTGTCAAGGCCGCCGCCTTGGCGCTATTTGCTGTACTCGGAATTCCCCTGGCGGTTACCTACAGTGTTCCTTTCGCACTAGCATCCATATTCTCCAGCTCCTCCGGAGCAGGTCAAGTTGGTAGTGTCATTGACAGTCGGACCATGGGATGCATTGTTCGGCGGCGGAAACTTGCCGGGATTTGTGGTGGGCGCCGTCGCAGCTACGATGAGCGGCATATTATCGATTGTCTTTTTGCCGTCTCCGCCAGTGAAGTTGGCCAAGAGAGAGTCGATCACCAGAAAAAATAA 1479 0.5538 MASQPSSPPVQTDASLPEPSPLWRMAAVASIAAGIQFEWSIQLSLLTPYVQLLGIPHTWAAFIWLCGPISGMLVQPVAGYHSDRCTSRFGRRRPFIAVGVLAVVIAVLLIGFAADLGHWFGDSLDEKTRPRSVVVFVVGFWILDVANNMILGPSRALLADLSSGDHRKTRTANSFFSFFMAVGNVLGYATGSSSKLHHMFPSTKTKACDVYCANLKSCFFVSIALLLILSIVALTSAKELRALPSLGNDGDDTVREGSGSSRYFKQPLGDFRELKRPMWILLLVTCLNWIAWFPFLFFDTDWMAKDVYGGKVEEGEAYDKGVRAGALGLMLNSLVLLVASLGMEVLVRGVGGLKKLWGIVNFLLSVCLASTVLVTKLAERSRLLAGGSHEPPPLPAGVKAAALALFAVLGIPLAVTYSVPFALASIFSSSSGAGQVGSVIDSRTMGCIVRRRKLAGICGGRRRSYDERHIIDCLFAVSASEVGQERVDHQKK 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0517 492 Gene3D MFS general substrate transporter like domains 22 243 IPR036259 -
Prci1g0517 492 NCBIfam sucrose/proton symporter 21 436 IPR005989 GO:0005886|GO:0008515|GO:0015770
Prci1g0517 492 SUPERFAMILY MFS general substrate transporter 25 440 IPR036259 -
Prci1g0517 492 Pfam MFS/sugar transport protein 31 191 - -
Prci1g0517 492 PANTHER SUGAR TRANSPORTER 21 434 - -
Prci1g0517 492 CDD MFS_SLC45_SUC 27 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0517 Prci-Chr1 4828411 4832219 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0517 2 435 Sucrose Transporter Gene Family AT1G22710 59.773 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0517 K15378 - gmx:547679 582.022