Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0516 ATGGCTTCTCAGCCTTCTTCTCCTTCCGTTCAACCTCATGCCTCGCCACCAGAGCCAAGCCCTCTGAGGAAAATTGCTGCCGCCGCCTCTATTGCGGCTGGGATTCAATTCGGATGGTCTATTCAGCTCTCCTTGCTAACTCCCTATGTTCAGCTTCTCGGTATTCCACACACTTGGGCTGCTTTTATATGGCTCTGTGGTCCTATCTCCGGTATGTTGTTTCAACCGATTTTCGGTTACCACAGTGACCGCTGCACCTCCCGGTTCGGCCGCCGCCGCCCGTTTATCGCGGTTGGTGTACTCGCTGTCGTCATCGCCGTTCTCTTGATCGGTTTTGCCGCTGATCTTGGCCACCGGTTCGGGGACTCACTGGATAAGAAAACGCGGCCACGGTCCGTCGTTGTCTTCGTCGTCGGATTCTGGATCCTCGACGTGGCCAATAACATGATTCAAGGTCCGTGCAGAGCTCTATTGGCAGACCTCTCCGCCGGCGACCACCGGAAGACGCGGACCGCGAACGCGTTTTACTCGTTCTTCATGGCCGTCGGAAATGTCCTTGGATACGCCACCGGATCCTACAGTAAGCTCCACCATATGTTTCCGTTCACGAAAACCAAAGCCTGTGACGTGTACTGCGCGAACCTGAAGAGCTGCTTCTTCGTCTCCATGGCTCTTCTGCTCATTCTCTCAATCGTCGCTCTCACGTCTGCGAAGGAGCTCAGGGCAATTCCGTCGTTTCGGCATGACGGGGATGATACGGTGGGTGAGGGGTCAGGGAGCTTACGGTATTTCAAACGACTGTTGGGTGCTGTTCGGGAGCTCAAGAGGCCGATGTGGATTTTACTCCTGGTGACGTGTCTTAACTGGATTGCTTGGTTCCCCTTTTTGTTGTTCGACAGTGATTGGATGGGAAGGGAAGTGTACGGGGGAAAGGTTGGGGAAGGTGAGGCGTACGATAAGGGCGTGCGCGCAGGTGCATTGGGTCTTATGCTCAACTCTCTGGTGCTGCTTGTGGCGTCGCTGGGCATGGAGGTACTGGTGCGTGGGCTTGGAGGCATGAAGAAGTTATGGGGGATCGGAAACTTCATGCTTGCTGTGTGTTTGGCCTCGACAGTGCTTGTTACCAAGTTGGCTGACCGATCACGACAGTTCCCCGTCGGCCCCGACGATCCTCCACGACTGCCCGCCGGTGTTAAAGGCGCCGCTTTGGCAGTCTTCATGCTACTAGGCATCCCCCTCGCAATTAATTACAGTGTTCCTTTTGCTCTAGCAGCCATTTACTCGAGCTCCTCCGGGACTGGCCAAGGATTATCGATGGGAGTTCTAAACCTTGCCATTGTGATACCACAGTGGTAA 1356 0.5487 MASQPSSPSVQPHASPPEPSPLRKIAAAASIAAGIQFGWSIQLSLLTPYVQLLGIPHTWAAFIWLCGPISGMLFQPIFGYHSDRCTSRFGRRRPFIAVGVLAVVIAVLLIGFAADLGHRFGDSLDKKTRPRSVVVFVVGFWILDVANNMIQGPCRALLADLSAGDHRKTRTANAFYSFFMAVGNVLGYATGSYSKLHHMFPFTKTKACDVYCANLKSCFFVSMALLLILSIVALTSAKELRAIPSFRHDGDDTVGEGSGSLRYFKRLLGAVRELKRPMWILLLVTCLNWIAWFPFLLFDSDWMGREVYGGKVGEGEAYDKGVRAGALGLMLNSLVLLVASLGMEVLVRGLGGMKKLWGIGNFMLAVCLASTVLVTKLADRSRQFPVGPDDPPRLPAGVKGAALAVFMLLGIPLAINYSVPFALAAIYSSSSGTGQGLSMGVLNLAIVIPQW 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0516 451 MobiDBLite consensus disorder prediction 1 21 - -
Prci1g0516 451 PANTHER SUGAR TRANSPORTER 23 450 - -
Prci1g0516 451 FunFam Sucrose transporter SUC2 23 243 - -
Prci1g0516 451 SUPERFAMILY MFS general substrate transporter 23 448 IPR036259 -
Prci1g0516 451 Gene3D MFS general substrate transporter like domains 23 241 IPR036259 -
Prci1g0516 451 CDD MFS_SLC45_SUC 36 450 - -
Prci1g0516 451 Pfam MFS/sugar transport protein 33 289 - -
Prci1g0516 451 NCBIfam sucrose/proton symporter 21 450 IPR005989 GO:0005886|GO:0008515|GO:0015770
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0516 Prci-Chr1 4818940 4822433 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0516 6 450 Sucrose Transporter Gene Family AT1G71890 60.841 0.0 564
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0516 K15378 - gmx:547679 653.284