Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0515 ATGGCTTCTCAGCCTTCTTCTCCTTCCGTTCAACCTCATGCCTCGCCACCAGAGCCAAGCCCTCTGAGGAAAATTGCTGCCGCCGCCTCTATTGCGGCTGGGATTCAATTCGGATGGTCTATTCAGCTCTCCTTGCTAACTCCCTATGTTCAGCTTCTCGGTATTCCACACACTTGGGCTGCTTTTATATGGCTCTGTGGTCCTATCTCCGGTATGTTGTTTCAACCGATTTTCGGTTACCACAGTGACCGCTGCACCTCCCGGTTCGGCCGCCGCCGCCCGTTTATCGCGGTTGGTGTACTCGCTGTCGTCATCGCCGTTCTCTTGATCGGTTTTGCCGCTGATCTTGGCCACCGGTTCGGGGACTCACTGGATAAGAAAACGCGGCCACGGTCCGTCGTTGTCTTCGTCGTCGGATTCTGGATCCTCGACGTGGCCAATAACATGATTCAAGGTCCGTGCAGAGCTCTATTGGCAGACCTCTCCGCCGGCGACCACCGGAAGACGCGGACCGCGAACGCGTTTTACTCGTTCTTCATGGCCGTCGGAAATGTCCTTGGATACGCCACCGGATCCTACAGTAAGCTCCACCATATGTTTCCGTTCACGAAAACCAAAGCCTGTGACGTGTACTGCGCGAACCTGAAGAGCTGCTTCTTCGTCTCCATGGCTCTTCTGCTCATTCTCTCAATCGTCGCTCTCACGTCTGCGAAGGAGCTCAGGGCAATTCCGTCGTTTCGGCATGACGGGGATGATACGGTGGGTGAGGGGTCAGGGAGCTTACGGTATTTCAAACGACTGTTGGGTGCTGTTCGGGAGCTCAAGAGGCCGATGTGGATTTTACTCCTGGTGACGTGTCTTAACTGGATTGCTTGGTTCCCCTTTTTGTTGTTCGACAGTGATTGGATGGGAAGGGAAGTGTACGGGGGAAAGGTTGGGGAAGGTGAGGCGTACGATAAGGGCGTGCGCGCAGGTGCATTGGGTCTTATGCTCAACTCTCTGGTGCTGCTTGTGGCGTCGCTGGGCATGGAGGTACTGGTGCGTGGGCTTGGAGGCATGAAGAAGTTATGGGGGATCGGAAACTTCATGCTTGCTGTGTGTTTGGCCTCGACAGTGCTTGTTACCAAGTTGGCTGACCGATCACGACAGTTCCCCGTCGGCCCCGACGATCCTCCACGACTGCCCGCCGGTGTTAAAGGCGCCGCTTTGGCAGTCTTCATGCTACTAGGCATCCCCCTCGCAATTAATTACAGTGTTCCTTTTGCTCTAGCAGCCATTTACTCGAGCTCCTCCGGGACTGGCCAAGGATTATCGATGGGAGTTCTAAACCTTGCCATTGTGATACCACAGATGATTGTATCAGTGGTAAGTGGACCATGGGATGCGTTGTTTGGCGGAGGAAACTTGCCGGCGTTCGTGGTGGGTGCGACGGCCGCTGCGGCTAGCGGTATTTTATCAATTGTTTTGTTGCCGTATCCTCCGTTGAAGTTGCCAAAGCGGACACCCACAACCACAGCTGATGACGCAGAGATTGTCACCAGTAAAAATAATTAA 1554 0.5431 MASQPSSPSVQPHASPPEPSPLRKIAAAASIAAGIQFGWSIQLSLLTPYVQLLGIPHTWAAFIWLCGPISGMLFQPIFGYHSDRCTSRFGRRRPFIAVGVLAVVIAVLLIGFAADLGHRFGDSLDKKTRPRSVVVFVVGFWILDVANNMIQGPCRALLADLSAGDHRKTRTANAFYSFFMAVGNVLGYATGSYSKLHHMFPFTKTKACDVYCANLKSCFFVSMALLLILSIVALTSAKELRAIPSFRHDGDDTVGEGSGSLRYFKRLLGAVRELKRPMWILLLVTCLNWIAWFPFLLFDSDWMGREVYGGKVGEGEAYDKGVRAGALGLMLNSLVLLVASLGMEVLVRGLGGMKKLWGIGNFMLAVCLASTVLVTKLADRSRQFPVGPDDPPRLPAGVKGAALAVFMLLGIPLAINYSVPFALAAIYSSSSGTGQGLSMGVLNLAIVIPQMIVSVVSGPWDALFGGGNLPAFVVGATAAAASGILSIVLLPYPPLKLPKRTPTTTADDAEIVTSKNN 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0515 517 MobiDBLite consensus disorder prediction 1 21 - -
Prci1g0515 517 PANTHER SUGAR TRANSPORTER 23 490 - -
Prci1g0515 517 CDD MFS_SLC45_SUC 36 485 - -
Prci1g0515 517 Pfam MFS/sugar transport protein 33 289 - -
Prci1g0515 517 SUPERFAMILY MFS general substrate transporter 23 493 IPR036259 -
Prci1g0515 517 Gene3D MFS general substrate transporter like domains 19 489 IPR036259 -
Prci1g0515 517 FunFam Sucrose transport protein 19 490 - -
Prci1g0515 517 NCBIfam sucrose/proton symporter 21 494 IPR005989 GO:0005886|GO:0008515|GO:0015770
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0515 Prci-Chr1 4818744 4822433 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0515 6 498 Sucrose Transporter Gene Family AT1G71890 61.400 0.0 625
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0515 K15378 - gmx:547679 718.383