Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0503 ATGGAAGATCCGGAGGAAGAAGAGCTTCTGAATCTGAGCCTCTCAGTTTCTGCAGGTAGAGAGAGGAAAAAGAAAGGGAAGATGATGATGATCAGTACGAGAGATCATCACAGCAATATTAATAGTTCCTGTTTCTCGTCGTATGAACAAGGCTTCGAAAGCAGGATCTTCAGGCTGCTTCAAACCAGAGAGCAAATGCTTCGTCAAGATCACAATCTCATGAGAAATAATAATATTCATGGCAGAGGAGTTTTGGAAGACGGTAATGGCCTCCCTCTGATTCATCTCCTTCTCAGTACAGCCACTTGTGTCGACGACGCCAACATTAACTCCGGCCTAGACAACCTCGCTCAGCTCTACCACACCGTCTCTCTCACCGGTGACTCCGTCCAACGAGTCGTCGCTTACTTCGCCGATGGTCTCGCCGCCCGGCTTCTCACCCGCAAATCCCCCTTCTACGACATGCTCATGGAAGAACCCACAAGCGAAGAAGAGTTCTTAGCGTTCACTGATCTTTATCGAGTCTCACCGTACTACCAATTCGCTCACTTCACAGCCAACCAAGCCATCCTCGAAGCCTTCGAGAACGAGGAAGACAGGAACAACCGAGCATTGCATGTCATCGACTTCGATGTCTCCTATGGTTTTCAATGGCCTTCTCTTATACAATCTCTCTCCGAGAAGGCCACCAGCGGGAACAGAATATCTCTGAGAATCACTGGATTCGGGAAGAACCTCAAAGAGCTTCAAGAAACAGAATCGCGTTTGATCAGTTTCTCAAAGGGATTCACCAATCTGGTGTTTGAATTCCAAGGCCTGCTTCGAGGCTCACGTGTGATTAACCTAAGGAAGAAAAAAAATGAAACAGTGGGTGTGAATCTGGTGTCTTACTTGAACACATTGAGTAGTTTCATGAAGATTTCTGACACATTGGGATTTGTTCATTCCCTGAATCCCTCCATTGTTGTGCTGGTCGAGCAAGAAGGAAGTAGAAGCCCCAGAACGTTCCTGTCGAGATTCACTGATTCGTTGCACTATTTCGCCGCCATGTTCGATTCTCTGGATGATTGTTTACCTCTGGACAGCACAGAGAGGTTGAGGATAGAGAAGAAGCTTCTGGGAAAGGAGATCAAGGCGATGCTGAATAACTACGACGTGGACGGCGTGGATTGTCCCAAGTACGAGAGGATGGAGACGTGGAAGGCGAGGATGGAGGGCCATGGATTCTCAGGAACAAAAGTCAGCTCTAAGGCTTTGATTCAAGCAAAGCTATTGTTGAAGATGAGGACTCATTACTCTCCACTTCAGTTTGAAGACGAAGAAGGTGGTGGCGGTTTCAGGGTTTCAGAGAGAGACGAAGGAAGAGCCATATCTTTGGGTTGGCAAAATAGGTTTCTTCTTACGGTCTCGGCATGGCAGGCAGTGTGA 1428 0.4755 MEDPEEEELLNLSLSVSAGRERKKKGKMMMISTRDHHSNINSSCFSSYEQGFESRIFRLLQTREQMLRQDHNLMRNNNIHGRGVLEDGNGLPLIHLLLSTATCVDDANINSGLDNLAQLYHTVSLTGDSVQRVVAYFADGLAARLLTRKSPFYDMLMEEPTSEEEFLAFTDLYRVSPYYQFAHFTANQAILEAFENEEDRNNRALHVIDFDVSYGFQWPSLIQSLSEKATSGNRISLRITGFGKNLKELQETESRLISFSKGFTNLVFEFQGLLRGSRVINLRKKKNETVGVNLVSYLNTLSSFMKISDTLGFVHSLNPSIVVLVEQEGSRSPRTFLSRFTDSLHYFAAMFDSLDDCLPLDSTERLRIEKKLLGKEIKAMLNNYDVDGVDCPKYERMETWKARMEGHGFSGTKVSSKALIQAKLLLKMRTHYSPLQFEDEEGGGGFRVSERDEGRAISLGWQNRFLLTVSAWQAV 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0503 475 ProSiteProfiles GRAS family profile. 84 473 IPR005202 -
Prci1g0503 475 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 76 468 IPR005202 -
Prci1g0503 475 Pfam GRAS domain family 93 473 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0503 Prci-Chr1 4755953 4757850 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0503 89 473 GRAS Transcription Factor Family AT1G14920 33.668 2.92e-53 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Prci1g0503 GRAS 1.1e-89 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0503 - - gmx:100813979 752.666