Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0498 ATGGTTGCGGGTGATGAAAACAACGACGCTTGTCTGGATGCACTGTGGCTATCAAGTGGCCAAGTGTATCCCGCAGTTTTGAACGCAGCGATTGAGTTAAACCTATTCGAAATCATCGGACGAGGAAACCCTAAGGGCATGTCACCTTCTGAAATTGCTTCAGAGCTTCCGACTCAGGATCAACATCCAGACACGCCCCAGAGACTGGATCGCATGCTGTTTCTGCTAGCAAGCCATTCTCTTCTCTCTTGGTCTAAACAACGATTTGACGAAGACGAAGACGAAGAAGAGGATAAAGTTGAGAGACTGTATCGACTCTCTCCCACTGGTTCATACTTAATCGCTGACGATGATCATGGAGCTTCCTTTGCTTCACTCTCAAAACTCTGTTGCCATCCTGCTTATATCAAAGTCTGGCAAAACTTCAAGGAAGTGATAAATGTGGATGAAGAGGACTTGTTTAAGAAGGTGCATGGCATGTCTATGTTTGAGTACATGGAAACAGATCCAAGTTTCAAGCCTTTGTTCCACAGAGCAATGGCGGATATATCTGCCATGCATATGAGGAAGATTCTGGAAACTTACAAAGGCTTTGAGGTCATATCAACACTTGTTGACGTGGCAGGTGGTATTGGTCAAAGCCTCAAAATGATCACTTCTAAGTACCCTTCCATCAAAGGCATTAACTTTGACTTGCCCCAAGTCGTTCAACATGCCCCTTCGTACCCAGGAGTTACGCATGTTGGAGGTGATATGTTCAAAAGTATCCCAGAAGGCGATGCAATAATGATCAAGGCTGCCACTCATAACTGGAGTGATGAGAAGTGCGTACAAGTTCTGAAGAACTGCCATAAATCACTGAAGAAAGGAGGAAAAGTGATTCTGATAGACTTAATAATGCCAGAAATCCCAAAGGCAAGTGATGGAGATAAGTATGTGACCATTCTGGACAATGTGATGTTTCTTCAAGCTGGTGGAAAAGAAAGAACGGAGAAAGAATTTGCAGCTCTGTGTAAAAGTTCTGGCTTTTCTGGATATCAAATTGCTGCTTCTGTCTTCTCCGTTCTCGGAGTCATTGAGTTTTACAAATAA 1092 0.4359 MVAGDENNDACLDALWLSSGQVYPAVLNAAIELNLFEIIGRGNPKGMSPSEIASELPTQDQHPDTPQRLDRMLFLLASHSLLSWSKQRFDEDEDEEEDKVERLYRLSPTGSYLIADDDHGASFASLSKLCCHPAYIKVWQNFKEVINVDEEDLFKKVHGMSMFEYMETDPSFKPLFHRAMADISAMHMRKILETYKGFEVISTLVDVAGGIGQSLKMITSKYPSIKGINFDLPQVVQHAPSYPGVTHVGGDMFKSIPEGDAIMIKAATHNWSDEKCVQVLKNCHKSLKKGGKVILIDLIMPEIPKASDGDKYVTILDNVMFLQAGGKERTEKEFAALCKSSGFSGYQIAASVFSVLGVIEFYK 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0498 363 Gene3D - 2 113 IPR036388 -
Prci1g0498 363 PANTHER O-METHYLTRANSFERASE 17 349 IPR016461 GO:0008168
Prci1g0498 363 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 15 363 IPR016461 GO:0008168
Prci1g0498 363 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 122 361 IPR029063 -
Prci1g0498 363 SUPERFAMILY "Winged helix" DNA-binding domain 6 118 IPR036390 -
Prci1g0498 363 Gene3D Vaccinia Virus protein VP39 115 363 IPR029063 -
Prci1g0498 363 CDD AdoMet_MTases 203 300 - -
Prci1g0498 363 Pfam O-methyltransferase domain 139 344 IPR001077 GO:0008171
Prci1g0498 363 FunFam Caffeic acid 3-O-methyltransferase 1 113 - -
Prci1g0498 363 Pfam Dimerisation domain 26 77 IPR012967 GO:0046983
Prci1g0498 363 PIRSF O-mtase 2 363 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0498 Prci-Chr1 4708273 4711169 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0498 7 363 Monolignol Biosynthesis Gene Families AT5G54160 48.603 2.10e-110 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0498 - - qsu:112031144 415.616