Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0497 ATGAAATCTCTCTCTAATGGACAAGACGGTCTTGAAGAGGGCGAATATGATGCTTGCCTTCGGGCCATGATTCTAAGTGCTGGTCAGGTAAACGCTGCCGTTTTGAACGCCGCACTTGAGCTTAACTTGTATGACGTCATTTCTGAATCAAAAGGATCGGAGGATGGTTTTGTTTCGCCCACTGAGATCGCTTCCAGACTCACCTCCCACAAGAGCCAGTCCAACACCGTAGCCGTCGCCGGCAGGCTCGACCGGATGCTACGGTTGCTGGTGGCTCACTCGATTCTCACCTGTTCCGTGAGAAGCACCGACGACGACGACGACACCACCCAGAGGCTCTACGGGATCTCTCCCGCCGGCCAATACTTTGTCTCCAAACAAGACGATGCTTCTTGGGCTTCCTTGATGCCCAGCATATCCTACCATCCTCACATGTCACACGTTTTTTTGAACTTGAAAGAAGCAGTGCTGAAGCTGAAGGAGGGGGAAGACCTGAGCAAGATAGTTCATGGCAAGAGTGTGTACGAGTACATGGAAACCGATTCTGCACTGAAGAGCAAGTTCCAGAGAACAATGGCGGATCAGTCAGCTATGCATATGGACAAGATTCTGCAGACTTACAAAGGCTTTGAGGGATTATCCACTCTCGTCGACGTGGCTGGTGGCACTGGCTACTCCCTCAATATGATCATATCCAACTATCCTTCAATTCTGGGTATCAACTTTGATTTGCCCCATGTCCTTCGAGATGCCCCTGCCTATCCAGGAATAAAGCATGTTGGAGGAGACATGTTCAAGAGTGTTCCCAGAGGTGACGCTATCATGATCAAGGGCACGACTCATAACTGGTCAGATGAAAAATGCATACAGATATTTAGAAACTGCCACGAGGCCTTGAAGAAAGGAGGGAAGGTGATTGTGATAGACTTGATAATGGAGGAAGAGCCACAGATAAGCAATGCTGCCAAGAATGTTTCCATTCTTGACTTAGTTATGTTCTCTCAAGGAGGAGGACGTGAAAGAACTGAGAAACAGTTTCAAGCTTTGTGCTTCAAATCTGGCTTTTCTCGCTTTCGACTTGCTTCTCGTGTCCTCTCCATTTTAGGCGTCATGGAATTTTACAAGGATTAG 1131 0.481 MKSLSNGQDGLEEGEYDACLRAMILSAGQVNAAVLNAALELNLYDVISESKGSEDGFVSPTEIASRLTSHKSQSNTVAVAGRLDRMLRLLVAHSILTCSVRSTDDDDDTTQRLYGISPAGQYFVSKQDDASWASLMPSISYHPHMSHVFLNLKEAVLKLKEGEDLSKIVHGKSVYEYMETDSALKSKFQRTMADQSAMHMDKILQTYKGFEGLSTLVDVAGGTGYSLNMIISNYPSILGINFDLPHVLRDAPAYPGIKHVGGDMFKSVPRGDAIMIKGTTHNWSDEKCIQIFRNCHEALKKGGKVIVIDLIMEEEPQISNAAKNVSILDLVMFSQGGGRERTEKQFQALCFKSGFSRFRLASRVLSILGVMEFYKD 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0497 376 Gene3D - 4 123 IPR036388 -
Prci1g0497 376 Pfam O-methyltransferase domain 150 356 IPR001077 GO:0008171
Prci1g0497 376 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 23 375 IPR016461 GO:0008168
Prci1g0497 376 FunFam Caffeic acid 3-O-methyltransferase 5 123 - -
Prci1g0497 376 Pfam Dimerisation domain 34 91 IPR012967 GO:0046983
Prci1g0497 376 SUPERFAMILY "Winged helix" DNA-binding domain 14 127 IPR036390 -
Prci1g0497 376 Gene3D Vaccinia Virus protein VP39 125 375 IPR029063 -
Prci1g0497 376 CDD AdoMet_MTases 215 312 - -
Prci1g0497 376 PIRSF O-mtase 1 375 IPR016461 GO:0008168
Prci1g0497 376 PANTHER O-METHYLTRANSFERASE 23 373 IPR016461 GO:0008168
Prci1g0497 376 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 140 361 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0497 Prci-Chr1 4697087 4699751 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0497 17 367 Monolignol Biosynthesis Gene Families AT5G54160 42.330 6.37e-93 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0497 - - qsu:112031144 363.999