Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0495 ATGGGCTCCCATTCCGGTTTCTGTGAGAATAATAATAACCTAAACGTGGCACAGGACAAGGCTTGCCTCTCCGCCATGTTGCTGACGACCAATCAGGTGTATCCAGCTGTCCTGAACGCAGCCATTGAGCTTAACCTCTTTGACATCCTGGCCAATAAGGCCTCGCCACCTGGCTCCTTCATGTCCGCCGCCGAAATCGCGTCCCACCTTCCCTCCCGCCACCTTGACACGCCCGACAGGCTGGAACGCATGCTTCGCCTTCTAGCCAGTTACACCCTCCTCACGTGCTCCTCACGTGACATCCCCGATGGTTCCTCCATCACTGTCTACGGCCTCTCCCCTGTCGGCAAATACTGCGTCACCAATGAAACTGGTGGCTACTTGGCTTCCTTCACCACCTTCCTCTGCTACAAAGCCCTCCTGGAAATTTGGATGAACTTCAAGGAAGCAGTGATGGATCCAGACGTGGACCTGTTCAAGAAGGTTCATGGGAAGACGAGCTACGAGTACTTCGGGACGGATCCGAAGTTGAACCACATCTTCAACAAAGCTATGGCGGACGTGTGTGCAACGGAGATGAATAGGGTTCTTGAGCTGTACAAAGGGTTTGAGGGAATATCAACGTTGGTCGATGTCGGAGGTGGCAACGGCCAAAACCTCAGACTCATCATCTCCAGATACCCTTCAATCCGTGGACTCAACTTCGATCTTCCCCAAGTCATCCAACATGCACCCCTCATTCCTGGGATAGAGCATATTGGGGGAGACATGTTCGTAAACGTTCCCAAGGGTGATGCCGTTATCTTGAAGGCCGTGTGCCATAACTGGTCGGACGAGAAATGCATAGAGTTTCTGAGAAAGTGTCACGAAGCATTGCCAGAAAATGGGAAGGTGATAGTGGTGGAGTTCATATTACCAGAATCGCCAGAGCCGACGGAAGCATCAAAGTTAGTTTCAACTCTGGACAATCTCATGTTCATCACTGTCGGTGGAAGGGAAAGAACAGAGAAACAGTACGAGACTTTGGGGAAGCGTTCTGGTTTTCCTAGGTTTCAGGTTGCTTGTCGTGCCTTCTCTGCTCTGGGAGTCATGGAGTTCTATAAATAA 1107 0.5113 MGSHSGFCENNNNLNVAQDKACLSAMLLTTNQVYPAVLNAAIELNLFDILANKASPPGSFMSAAEIASHLPSRHLDTPDRLERMLRLLASYTLLTCSSRDIPDGSSITVYGLSPVGKYCVTNETGGYLASFTTFLCYKALLEIWMNFKEAVMDPDVDLFKKVHGKTSYEYFGTDPKLNHIFNKAMADVCATEMNRVLELYKGFEGISTLVDVGGGNGQNLRLIISRYPSIRGLNFDLPQVIQHAPLIPGIEHIGGDMFVNVPKGDAVILKAVCHNWSDEKCIEFLRKCHEALPENGKVIVVEFILPESPEPTEASKLVSTLDNLMFITVGGRERTEKQYETLGKRSGFPRFQVACRAFSALGVMEFYK 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0495 368 FunFam Caffeic acid 3-O-methyltransferase 6 119 - -
Prci1g0495 368 Gene3D Vaccinia Virus protein VP39 121 368 IPR029063 -
Prci1g0495 368 Pfam Dimerisation domain 37 89 IPR012967 GO:0046983
Prci1g0495 368 Pfam O-methyltransferase domain 144 348 IPR001077 GO:0008171
Prci1g0495 368 CDD AdoMet_MTases 208 305 - -
Prci1g0495 368 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 127 363 IPR029063 -
Prci1g0495 368 SUPERFAMILY "Winged helix" DNA-binding domain 19 123 IPR036390 -
Prci1g0495 368 FunFam Caffeic acid O-methyltransferase 122 368 - -
Prci1g0495 368 Gene3D - 7 119 IPR036388 -
Prci1g0495 368 PIRSF O-mtase 7 368 IPR016461 GO:0008168
Prci1g0495 368 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 26 368 IPR016461 GO:0008168
Prci1g0495 368 PANTHER O-METHYLTRANSFERASE 25 358 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0495 Prci-Chr1 4655441 4657856 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0495 14 368 Monolignol Biosynthesis Gene Families AT5G54160 47.191 1.98e-120 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0495 - - gmx:100798347 535.413