LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci1g0495	ATGGGCTCCCATTCCGGTTTCTGTGAGAATAATAATAACCTAAACGTGGCACAGGACAAGGCTTGCCTCTCCGCCATGTTGCTGACGACCAATCAGGTGTATCCAGCTGTCCTGAACGCAGCCATTGAGCTTAACCTCTTTGACATCCTGGCCAATAAGGCCTCGCCACCTGGCTCCTTCATGTCCGCCGCCGAAATCGCGTCCCACCTTCCCTCCCGCCACCTTGACACGCCCGACAGGCTGGAACGCATGCTTCGCCTTCTAGCCAGTTACACCCTCCTCACGTGCTCCTCACGTGACATCCCCGATGGTTCCTCCATCACTGTCTACGGCCTCTCCCCTGTCGGCAAATACTGCGTCACCAATGAAACTGGTGGCTACTTGGCTTCCTTCACCACCTTCCTCTGCTACAAAGCCCTCCTGGAAATTTGGATGAACTTCAAGGAAGCAGTGATGGATCCAGACGTGGACCTGTTCAAGAAGGTTCATGGGAAGACGAGCTACGAGTACTTCGGGACGGATCCGAAGTTGAACCACATCTTCAACAAAGCTATGGCGGACGTGTGTGCAACGGAGATGAATAGGGTTCTTGAGCTGTACAAAGGGTTTGAGGGAATATCAACGTTGGTCGATGTCGGAGGTGGCAACGGCCAAAACCTCAGACTCATCATCTCCAGATACCCTTCAATCCGTGGACTCAACTTCGATCTTCCCCAAGTCATCCAACATGCACCCCTCATTCCTGGGATAGAGCATATTGGGGGAGACATGTTCGTAAACGTTCCCAAGGGTGATGCCGTTATCTTGAAGGCCGTGTGCCATAACTGGTCGGACGAGAAATGCATAGAGTTTCTGAGAAAGTGTCACGAAGCATTGCCAGAAAATGGGAAGGTGATAGTGGTGGAGTTCATATTACCAGAATCGCCAGAGCCGACGGAAGCATCAAAGTTAGTTTCAACTCTGGACAATCTCATGTTCATCACTGTCGGTGGAAGGGAAAGAACAGAGAAACAGTACGAGACTTTGGGGAAGCGTTCTGGTTTTCCTAGGTTTCAGGTTGCTTGTCGTGCCTTCTCTGCTCTGGGAGTCATGGAGTTCTATAAATAA	1107	0.5113	MGSHSGFCENNNNLNVAQDKACLSAMLLTTNQVYPAVLNAAIELNLFDILANKASPPGSFMSAAEIASHLPSRHLDTPDRLERMLRLLASYTLLTCSSRDIPDGSSITVYGLSPVGKYCVTNETGGYLASFTTFLCYKALLEIWMNFKEAVMDPDVDLFKKVHGKTSYEYFGTDPKLNHIFNKAMADVCATEMNRVLELYKGFEGISTLVDVGGGNGQNLRLIISRYPSIRGLNFDLPQVIQHAPLIPGIEHIGGDMFVNVPKGDAVILKAVCHNWSDEKCIEFLRKCHEALPENGKVIVVEFILPESPEPTEASKLVSTLDNLMFITVGGRERTEKQYETLGKRSGFPRFQVACRAFSALGVMEFYK	368

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci1g0495	368	FunFam	Caffeic acid 3-O-methyltransferase	6	119	-	-
	Prci1g0495	368	Gene3D	Vaccinia Virus protein VP39	121	368	IPR029063	-
	Prci1g0495	368	Pfam	Dimerisation domain	37	89	IPR012967	GO:0046983
	Prci1g0495	368	Pfam	O-methyltransferase domain	144	348	IPR001077	GO:0008171
	Prci1g0495	368	CDD	AdoMet_MTases	208	305	-	-
	Prci1g0495	368	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	127	363	IPR029063	-
	Prci1g0495	368	SUPERFAMILY	"Winged helix" DNA-binding domain	19	123	IPR036390	-
	Prci1g0495	368	FunFam	Caffeic acid O-methyltransferase	122	368	-	-
	Prci1g0495	368	Gene3D	-	7	119	IPR036388	-
	Prci1g0495	368	PIRSF	O-mtase	7	368	IPR016461	GO:0008168

Showing 1 to 10 of 12 entries

Previous1 2Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci1g0495	Prci-Chr1	4655441	4657856	Dispersed/Tandem

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci1g0495	14	368	Monolignol Biosynthesis Gene Families	AT5G54160	47.191	1.98e-120	351

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci1g0495	-		-	gmx:100798347	535.413

Showing 1 to 1 of 1 entries