Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0494 ATGAACGCTACAGAGAACAATCAGCATTATGTGATGAAATCTCTCTCTAATGGACAGGACGATCTTGAAGAGGGCGAATATGATGCTTGCCTTCGGGCCATGATTCTAAGTGCTGGTCAGGTAAACGCTGCCGTTTTGAACGCTGCACTTGAGCTAAACTTGTTTGACATCATTTCTGAATCAAAAGGATCGGAGGATGGTTTTGTTTCGCCCACTGAGATCGCTTCCAGACTCACCTCCCACAAGAGCCAGTCAGACACCGTCGCCGTCGCTGGCAGGCTCGACCGGATGCTACGCTTGCTGGTGGCTCACTCGCTTCTCACCTGTTCCGTGAGAATCACCGACGACGACGATGACACCACCCAGAAGCTCTACGGGATCTCTCCCACCGGCCAATACTTTGTCTCCAAACAAGACGGTGCTTCTTGGGCTTCCTTGATGCCCAGCATATCCTACCATCCTCACATGTCACACGTTTTTTTGAACTTGAAAGAAGCAGTGCTGAAGCTGAAGGAGGGGGAAGACCTGAGCAAGATAGTTCATGGCAAGAGTGTGTACGAGTACATGGAAACCGATTCTGCACTGAAGAGCAAGTTCCAGAGAACAATGGCGGATCAGTCAGCTATGCATATGGACAAGATTCTGCAGACTTACAAAGGCTTTGAGGGATTATCCACTCTCGTCGACGTGGCTGGTGGCACTGGCTACTCCCTCAATATGATCATATCCAACTATCCTTCAATTCTGGGTATCAACTTTGATTTGCCCCATGTCCTTCGAGATGCCCCTGCCTATCCAGGAATAAAGCATGTTGGAGGAGACATGTTCAAGAGTGTTCCCAGAGGTGACGCTATCATGATCAAGGGCACGACTCATAACTGGTCAGATGAAAAATGCATACAGATATTTAGAAACTGCTACGAGGCCTTGAAGAAAGGAGGGAAGTTGATTGTGATAGACTTGATAATGGAGGAAGAGCCAGAGATGAGCAATGCTGCGAAGAATGTTTCCATTCTTGACTTAGTTATGTTCTCTCAAGGAGGAGGACGTGAAAGAACTGAGAAACAGTTTCAAGCTTTGTGCTTGAAATCTGGCTTTTGTCGCTTTCGACTTGCTTCTCGTGTCCTCTCCATTTTAGGCGTCATGGAATTTTACAAGGATTAG 1164 0.4742 MNATENNQHYVMKSLSNGQDDLEEGEYDACLRAMILSAGQVNAAVLNAALELNLFDIISESKGSEDGFVSPTEIASRLTSHKSQSDTVAVAGRLDRMLRLLVAHSLLTCSVRITDDDDDTTQKLYGISPTGQYFVSKQDGASWASLMPSISYHPHMSHVFLNLKEAVLKLKEGEDLSKIVHGKSVYEYMETDSALKSKFQRTMADQSAMHMDKILQTYKGFEGLSTLVDVAGGTGYSLNMIISNYPSILGINFDLPHVLRDAPAYPGIKHVGGDMFKSVPRGDAIMIKGTTHNWSDEKCIQIFRNCYEALKKGGKLIVIDLIMEEEPEMSNAAKNVSILDLVMFSQGGGRERTEKQFQALCLKSGFCRFRLASRVLSILGVMEFYKD 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0494 387 CDD AdoMet_MTases 226 323 - -
Prci1g0494 387 PIRSF O-mtase 10 386 IPR016461 GO:0008168
Prci1g0494 387 Gene3D Vaccinia Virus protein VP39 136 386 IPR029063 -
Prci1g0494 387 PANTHER O-METHYLTRANSFERASE 34 384 IPR016461 GO:0008168
Prci1g0494 387 Pfam O-methyltransferase domain 161 366 IPR001077 GO:0008171
Prci1g0494 387 Pfam Dimerisation domain 45 102 IPR012967 GO:0046983
Prci1g0494 387 FunFam Caffeic acid 3-O-methyltransferase 14 134 - -
Prci1g0494 387 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 151 372 IPR029063 -
Prci1g0494 387 Gene3D - 12 134 IPR036388 -
Prci1g0494 387 SUPERFAMILY "Winged helix" DNA-binding domain 25 138 IPR036390 -
Prci1g0494 387 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 34 386 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0494 Prci-Chr1 4627739 4630440 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0494 28 366 Monolignol Biosynthesis Gene Families AT5G54160 44.118 3.74e-93 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0494 - - qsu:112031144 377.481