Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0493 ATGGGTTCCCATTCCGGTTTCTGTGAGAATAATAACAATCACGCCCTTGTGAAAGCTAATCCCTGTCCCCAGACACAGGACGAGGCTTGCCTCTCCGCTATGTTCCTGACGACCAATCAGGTGTATCCAGCTGTCCTGAACGCAGCCATTGAGCTTAACCTCTTTGACATCCTGGCCAATAAGGCCTCGCCACCTGGCTCCTCCATGTCCGCCGCCGAAATCGCCTCCCATCTTCCCTCCCGTCACCCCGATATGCCCGACAGGCTGGAACGCATGCTTCGCCTTCTAGCCAGTTACACTCTCCTCACGTGCTCCTCACGTGACATCTCCGATGGCTCCTCCATCACCGTCTACGGCCTCTCCCCCGTCGGCAAATACTGCGTCACCAATGAAACTGGTGGCTACTTGGCTTCCTTCACCACCTTCCTCTGCTACAAAGCCCTCCTGGAAATTTGGATGAACTTCAAGGAAGCAGTGATGGATCCAGACGTGGACCTGTTCAAGAAGGTTCATGGGAAGACGAGCTACGAGTACTTTGGGACGGATCCCACGTTGAACCACATCTTCAACAAAGCTATGGCGGACGTGTGTGCAATGGAGATGACTAGGGTTCTTGAGTTGTACAAAGGGTTCGAGGGAATATCAACGTTGGTCGATGTCGGAGGTGGCAACGGCCAAAACCTCAGACTCATCATCTCCAGATACCCTTCCATCCATGGAATCAACTTCGATCTTCCCCAGGTCATCCAACATGCACCCCCCATTCCTGGAATAGAACATATTGGGGGAGACATGTTCGTAAATGTTCCCAAGGGTGATGCCGTTATCTTGAAGGCCGTGTGCCACAACTGGTCGGACGAAAAATGCATAGAGTTTCTGAGGAAGTGTCACGAAGCATTGCCTGAAAATGGGAAGGTGATAGTGGTGGAGTTCATATTACCAGAATCGCCAGAGCCAACGGAAGCATCAAAGTTAGTTTCAACTCTGGACAATCTCATGTTCATTACTGTCGGTGGAAGGGAAAGAACAGAGAAACAGTACGAGACTTTGGGAAAGCGTTCTGGTTTTTCTAGGTTTCAGGTTGCTTGTCGTGCCTTCTCTGCTCTGGGAGTCATGGAGTTCTATAAATAA 1131 0.5075 MGSHSGFCENNNNHALVKANPCPQTQDEACLSAMFLTTNQVYPAVLNAAIELNLFDILANKASPPGSSMSAAEIASHLPSRHPDMPDRLERMLRLLASYTLLTCSSRDISDGSSITVYGLSPVGKYCVTNETGGYLASFTTFLCYKALLEIWMNFKEAVMDPDVDLFKKVHGKTSYEYFGTDPTLNHIFNKAMADVCAMEMTRVLELYKGFEGISTLVDVGGGNGQNLRLIISRYPSIHGINFDLPQVIQHAPPIPGIEHIGGDMFVNVPKGDAVILKAVCHNWSDEKCIEFLRKCHEALPENGKVIVVEFILPESPEPTEASKLVSTLDNLMFITVGGRERTEKQYETLGKRSGFSRFQVACRAFSALGVMEFYK 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0493 376 FunFam Caffeic acid 3-O-methyltransferase 12 127 - -
Prci1g0493 376 Gene3D - 10 127 IPR036388 -
Prci1g0493 376 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 34 376 IPR016461 GO:0008168
Prci1g0493 376 PIRSF O-mtase 13 376 IPR016461 GO:0008168
Prci1g0493 376 Gene3D Vaccinia Virus protein VP39 129 376 IPR029063 -
Prci1g0493 376 Pfam Dimerisation domain 45 97 IPR012967 GO:0046983
Prci1g0493 376 PANTHER O-METHYLTRANSFERASE 33 366 IPR016461 GO:0008168
Prci1g0493 376 CDD AdoMet_MTases 216 313 - -
Prci1g0493 376 SUPERFAMILY "Winged helix" DNA-binding domain 27 131 IPR036390 -
Prci1g0493 376 FunFam Caffeic acid O-methyltransferase 130 376 - -
Prci1g0493 376 Pfam O-methyltransferase domain 152 357 IPR001077 GO:0008171
Prci1g0493 376 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 135 372 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0493 Prci-Chr1 4595418 4598531 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0493 15 376 Monolignol Biosynthesis Gene Families AT5G54160 47.934 1.41e-123 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0493 - - gmx:100787536 543.502