Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0474 ATGCCAACACCACCACCACCAACAGCACCGTTTACCTCTCAAGAAACCCCTACCCCTACATCTCCTCCTTTATTATCTTCCTCTTATCCAATCACTCTCAAGTTCGTGGACGTGGGATACAGGGTAAAGGTGGAGAAAAAGAAAGGAGGGAGCAACATAAAGCGAATGATCTCGTCGGTGTCCGACGGGAGATCCACGGCGGCGCAGGAGAAAATCATTCTGAACGGTGTCACGGGGATAGTGTCTCCTGGAGAAATCCTGGCGGTGCTGGGACCGTCGGGGAGCGGGAAATCTACGCTCCTGAACGCGCTCGCAGGGAGACTTATCCAAGGGCAGGGACTCACCGGAACGATCCTCGCGAACGGATGCAAACTCAGCAAACCGATTCTCCGGCGAACCGGGTTCGTGACCCAGGACGACGTGCTCTATCCTCATCTCACGGTCCGTGAGACGCTGATCTTCTGCGCGCTTCTCCGCCTGCCGAGAGCATTCTCGAAAGCGGAGAAGATAGCCGTCTGCGATTCGGTGATCGCAGAGCTGGGACTGGTGAAATGCGAGAACACGATCATCGGAAATGCGTATATACGAGGGGTTTCAGGAGGAGAGAGGAAGAGAGTGAGTATAGGGCACGAGATGTTGATGAATCCGAGCTTGTTGATACTAGACGAGCCAACATCGGGGTTGGACTCGACGGCGGCGCACAGGCTGGTGACGACGCTGGGGACGGTGGTGGCGCAGCAGAAGGGGAAGACGGTGGTGGCGTCGGTGCACCAGCCGTCGAGCAGAGTGTTTCAGATGTTCGATAAGATCTTAGTGTTATCGGAAGGACAGTGTGTGTATTTCGGGAAAGGAAGTGAAGCCATGAACTACTTCGAGTCCCTTGGGTTCAAGCCGTCTTTCGCCATGAATCCCGCCGACTTTCTGCTTGATCTCGCTAACGGTGTTTGTCAAGGTGATAGTACAGTGAGTGAAAGAGACAAGTCAAATATAAAGCAAACCCTAGTCAGCTCTTACAACGCAACTTTAGCTCCCAAAGTCAAAGACGCAATATTAAACTGTACCGACCCATGCATGAAACACTCTCCTCAATCCCCTCATCATCGTCGTCTTCATCCCCTGGAAACCACGACGACCAGATCCAGATATCAAGCAAGATACAGTAAGTTCATGAACACCATCTCCTTCTCTAACTGGTTCAACCAGTTCACCGTCCTCCTCCACAGAAGCCTCAAAGAGCGAAAGCACGAGTCCTTCAACCCTCTCCGAGTCTTCCAGGTCCTCGCCGCCTCCCTCCTCGCAGGCCTCATGTGGTGGCACTCTGATTACGGCGACGTCCAGGACCGCCTCGGCCTCCTCTTCTTCATCTCTATCTTCTGGGGCGTCTTCCCTTCCTTCAACTCCGTCTTCGCCTTCCCTCAAGACCACGCCATCTTCATCAAGGAGCGAGCCTCCGGCATGTACACTCTCTCCCCTTACTTCACCGCCCGGATCGTCGGTGACCTCCCAATGGAGCTCCTCCTCCCCTTCATCTTCCTCACCGTCACCTACTGGATGAGCGGTCTCAGGCCAGACCTGTGGTCTTTTTTACTCACCGTACTAGTCGTTCTCTTCTACGTGCTCGTGTCTCAGGGACTTGGCCTTTTCCTCGGCGCCGCAATGATGGACGCCAAGCAGGCCTCCACGGTGGCCGCCGTGGTGATGCTAGGGTTTGTGTTGATCGGTGGGTATTATGTTCACAAGGTGCCTTCATGCATGGGGTGGCTCAAGTACGTATCCATAACTTTTTACTGTTACAGGCTTCTGATTTATATTCAGTATGGTAATGGGAAGAGAATCTCAGAATTTCTGGGTTGCTTTAACAATGGAGGAATAGTGGGTGATAGAGGACACTGTAAGTTTGTGGAACAAGACGTGGTGGGACAGATAAACCCTTGGGTAAGCTTTGGGGCTCTGGTTATGATGTTTATGGGGTATAGAATGTTGGCTTACCTTGCATTGAGGAAGATCAAGACTTGA 2016 0.5268 MPTPPPPTAPFTSQETPTPTSPPLLSSSYPITLKFVDVGYRVKVEKKKGGSNIKRMISSVSDGRSTAAQEKIILNGVTGIVSPGEILAVLGPSGSGKSTLLNALAGRLIQGQGLTGTILANGCKLSKPILRRTGFVTQDDVLYPHLTVRETLIFCALLRLPRAFSKAEKIAVCDSVIAELGLVKCENTIIGNAYIRGVSGGERKRVSIGHEMLMNPSLLILDEPTSGLDSTAAHRLVTTLGTVVAQQKGKTVVASVHQPSSRVFQMFDKILVLSEGQCVYFGKGSEAMNYFESLGFKPSFAMNPADFLLDLANGVCQGDSTVSERDKSNIKQTLVSSYNATLAPKVKDAILNCTDPCMKHSPQSPHHRRLHPLETTTTRSRYQARYSKFMNTISFSNWFNQFTVLLHRSLKERKHESFNPLRVFQVLAASLLAGLMWWHSDYGDVQDRLGLLFFISIFWGVFPSFNSVFAFPQDHAIFIKERASGMYTLSPYFTARIVGDLPMELLLPFIFLTVTYWMSGLRPDLWSFLLTVLVVLFYVLVSQGLGLFLGAAMMDAKQASTVAAVVMLGFVLIGGYYVHKVPSCMGWLKYVSITFYCYRLLIYIQYGNGKRISEFLGCFNNGGIVGDRGHCKFVEQDVVGQINPWVSFGALVMMFMGYRMLAYLALRKIKT 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0474 671 Pfam ABC transporter 74 226 IPR003439 GO:0005524
Prci1g0474 671 SMART AAA_5 83 277 IPR003593 GO:0016887
Prci1g0474 671 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 24 663 - -
Prci1g0474 671 MobiDBLite consensus disorder prediction 1 17 - -
Prci1g0474 671 Gene3D - 61 294 IPR027417 -
Prci1g0474 671 FunFam ABC transporter G family member 22 61 294 - -
Prci1g0474 671 Pfam ABC-2 type transporter 401 606 IPR013525 GO:0016020|GO:0140359
Prci1g0474 671 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 33 300 IPR003439 GO:0005524
Prci1g0474 671 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 68 294 IPR027417 -
Prci1g0474 671 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0474 Prci-Chr1 4405116 4414053 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0474 73 415 Calmodulin-binding Proteins AT2G36910 26.271 4.45e-13 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0474 K05681 - qsa:O6P43_004081 879.782