Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0458 ATGGAAAGGGCTCTTGGTGGTACTGCTCCTTATTGTGGGGGGTTTTCACTTTACACAGCAGATCCGGATACAGCGATGTCTGGAAGCACAAGTTGCACTGTTTACATAGGCAATCTAGATGAGAGGGTCACGGAGAGAATCTTATATGATATATTAATTCAAGCAGGACGAGTGGTGGACCTGTATATTCCTAGAGATAAGGAATCTGAGAAACCTAAAGGATTTGCCTTTGCAGAATATGAAAGTGAGGAGATTGCAGATTATGCTGTCAGGCTTTTCTCAGGCCTGGTGACGCTTTACAACAGAACACTGAAATTTGCGATATCTGGCCAAGACAAACCAACTCCAAATGGTTCTGCAGTGGCTACACCATCATCTAATTCTTCTCACCGATCGAGGCCCCACCCTGCGCCAATGAATAGTACAGAAATTTCTCAGCACTCTGCTAGGATATCAACACCTAGCCGAATTTCAGATTACCCTGTAAATTACTCCCGAGTTACCCACCGCGTAGTTGACCAAACTAGTGAGTATGGATCTCTCTCCAGTGGCAACAATTATGAATACAGCCGAAGAGTTTTTGGGCCAACATTGGATAGCATTAGCCGGTATAGGTCACGCCGCTATGATACAAGTAACCCAATCTCTTACCCATCTTACTAA 663 0.4449 MERALGGTAPYCGGFSLYTADPDTAMSGSTSCTVYIGNLDERVTERILYDILIQAGRVVDLYIPRDKESEKPKGFAFAEYESEEIADYAVRLFSGLVTLYNRTLKFAISGQDKPTPNGSAVATPSSNSSHRSRPHPAPMNSTEISQHSARISTPSRISDYPVNYSRVTHRVVDQTSEYGSLSSGNNYEYSRRVFGPTLDSISRYRSRRYDTSNPISYPSY 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0458 220 SMART rrm1_1 33 107 IPR000504 GO:0003723
Prci1g0458 220 PANTHER RNA BINDING MOTIF RBM PROTEIN -RELATED 26 217 - -
Prci1g0458 220 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 32 111 IPR000504 GO:0003723
Prci1g0458 220 MobiDBLite consensus disorder prediction 111 156 - -
Prci1g0458 220 Gene3D - 25 117 IPR012677 -
Prci1g0458 220 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 34 105 IPR000504 GO:0003723
Prci1g0458 220 SUPERFAMILY RNA-binding domain, RBD 23 119 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0458 Prci-Chr1 4305229 4309358 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0458 21 97 Eukaryotic Initiation Factors Gene Family AT4G34110 31.169 5.97e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0458 K12831 - gmx:100803118 287.345