Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0443 ATGGACTACAAAATCAAGACCACCACTTCTCCCTCTTCCTCCTCCTCTCCTCCGCCTCCAACTTCACAACCACAATCGCCGCCGTCTCCGGTGGTGGTTTCGCCTTGCGCGGCCTGCAAGATCCTCCGCCGTCGTTGTGTTGAGAAGTGCGTGCTGGCCCCCTATTTTCCACCGACCGATCCGCTCAAGTTCACCATTGCTCACCGAGTCTTCGGAGCCAGCAACATCATCAAGTTCTTGCAGGAGCTTCCAGAGTCGCAAAGAGCAGATGCGGTGAGCAGCATGGTGTACGAAGCAAATGCGAGGATAAGGGACCCAGTATACGGCTGCGCAGGAGCCATATGCCAGCTTCAGAAGCAGGTGAGCGAGCTGCAAGCTCAATTAGCTAAGGCTCAAGCCGAGCTGGTCAACATGCAATGCCAGCAGGCCAACTTGGTGGCTCTTATTTGCATGGAAATGAGCCAATCTCACCCTGACGAGCCCCACTCCACGATGGCGGCTCAGTTGGCTCAGCCGCCGCAGCACGAAGATATGAACTGCTTCTTAGACGACAACAACATGAACAACTTCGGCTCGGCTTGGGCTTGGGAGCCACTTTGGACATGA 606 0.5561 MDYKIKTTTSPSSSSSPPPPTSQPQSPPSPVVVSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEANARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAELVNMQCQQANLVALICMEMSQSHPDEPHSTMAAQLAQPPQHEDMNCFLDDNNMNNFGSAWAWEPLWT 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0443 201 MobiDBLite consensus disorder prediction 1 31 - -
Prci1g0443 201 Pfam Lateral organ boundaries (LOB) domain 35 132 IPR004883 -
Prci1g0443 201 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 34 169 - -
Prci1g0443 201 MobiDBLite consensus disorder prediction 13 31 - -
Prci1g0443 201 Coils Coil 114 141 - -
Prci1g0443 201 ProSiteProfiles LOB domain profile. 34 135 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0443 Prci-Chr1 4217172 4219018 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0443 31 201 AS2 family AT1G07900 67.442 4.07e-77 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Prci1g0443 LOB 2.2e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0443 - - vra:106771364 275.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g0443 1 4217172 4219018 Prci1g0443 1 4217172 4219018 ECH