Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0431 ATGGAAGATATTAAATCAGCTGAAGCAGAGAATGAGCAGAGCAAGTTTGCTTACTCTCTGGCTCTTGCAACTGCTGCTGCAGCAGAGGCTGCTGTTGCTGCAGCTCAGGCTGCAGCAGAGGTTGTTCGTCTTACTAGCATGTCCCGTTACCGTGGAAAGTCAAAGGAAGACATGGCAGCTATCAAAATTCAGACAGCATTTCGAGGATATTTGGCAAGAAGAGCATTGCGTGGCTTGAAAGGTTTGGTGAGGTTGAAGAGATTGGTACAAGGGAAATCTGTTAAACGACAAGCAGCTTCTACATTACGATGCATGCAGACCCTGACAAGATTGCAGTCTCAGGTTCATGAGAGGAGGGCTAGAATGTCAGAGGAGAACCAGGCTCTTCAGCGGCAGCTGCAGCAGAAACATGAAAAAGAACTTGAGAAGTTGCAAGCTGCTCAGATTGTTGAAGAATGGGATGATACAGCGCAATCAAAGGAGCAAATTGAAGCAAAACAGTCTAAAAGGCAAGAAGCTGCAGTTCGAAGAGAGAGAGCTCTGGCCTATGCATTTTCACATCAGCGAAAATGGAGGAACTCTTTGAAACCTGCAAATCCTACCACATTCATGGATCCAAACAATCCCCATTGGGGTTGGAGCTGGCTAGATCGATGGGTAGTGGCACAGCCTGCGGATGGCCGAAGCACTATGGATCACAGCGAGCGTGAATCTGCAAAAAGCATGGCGAGCCAACCCATGTCTGTTGGAGAAATTACTAAACTGTATGCTTCCCGCACTCATATACATCACGATAACAAGCCTGCTCCAGCTGGCCAAAAATCAAGCCGGCCTCCAAGTCACCGATCTTCTTCAACCCCACTTTCAAAGGCCCCATCTATCTTATCGACTTCTGGCAGAGTAAGGGCACCAAGCCCAAAGACAAGTTCTTGGGGCCGTCATGATGACTCAAGGAGCGCAATTAGTGCTCAGTCACAACGGTACCGTAGGCATACTATTTCGGGATCATCGTTCGGAGATGATGAGAGCTTTGCAAGCTCATCTGCCTTCTCAACTTGCACAGTTCCTACCAAGTCAGCTAAGGCCAAATCCAGAATTGAAAGCCCATCACTTGTTGCAGATAAAAAAGGGACACCAGAGAAAGGATCCAATGCAAAGAAGCGTCTATCCTTCTCGGGTTCCCTGGCAAGTTCGAGAAATCATTCAGGTCCTCTTAAGGTGGATCTTTTTGCTTCCAATAAGGATGCTGCTTCAGTCACTAAGACGAAAGTTGCCAATGGTGGCAGGTAG 1290 0.476 MEDIKSAEAENEQSKFAYSLALATAAAAEAAVAAAQAAAEVVRLTSMSRYRGKSKEDMAAIKIQTAFRGYLARRALRGLKGLVRLKRLVQGKSVKRQAASTLRCMQTLTRLQSQVHERRARMSEENQALQRQLQQKHEKELEKLQAAQIVEEWDDTAQSKEQIEAKQSKRQEAAVRRERALAYAFSHQRKWRNSLKPANPTTFMDPNNPHWGWSWLDRWVVAQPADGRSTMDHSERESAKSMASQPMSVGEITKLYASRTHIHHDNKPAPAGQKSSRPPSHRSSSTPLSKAPSILSTSGRVRAPSPKTSSWGRHDDSRSAISAQSQRYRRHTISGSSFGDDESFASSSAFSTCTVPTKSAKAKSRIESPSLVADKKGTPEKGSNAKKRLSFSGSLASSRNHSGPLKVDLFASNKDAASVTKTKVANGGR 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0431 429 SMART iq_5 55 77 IPR000048 GO:0005515
Prci1g0431 429 MobiDBLite consensus disorder prediction 263 404 - -
Prci1g0431 429 PANTHER IQ-DOMAIN 5-RELATED 9 406 - -
Prci1g0431 429 Gene3D iswi atpase 53 80 - -
Prci1g0431 429 MobiDBLite consensus disorder prediction 385 401 - -
Prci1g0431 429 ProSiteProfiles IQ motif profile. 56 84 IPR000048 GO:0005515
Prci1g0431 429 MobiDBLite consensus disorder prediction 226 249 - -
Prci1g0431 429 MobiDBLite consensus disorder prediction 276 305 - -
Prci1g0431 429 MobiDBLite consensus disorder prediction 315 364 - -
Prci1g0431 429 Coils Coil 112 142 - -
Prci1g0431 429 Pfam IQ calmodulin-binding motif 58 77 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0431 Prci-Chr1 4156143 4159693 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0431 1 415 IQD Protein Family AT3G52290 49.645 3.66e-99 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0431 - - tcc:18586349 457.988