Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0428 ATGGGGAGGAAAGGGAATTGGTTTTCTTCAGTGAGGAAAGTTCTCAGTCCTCATTCCAAGAAAGATCAGGACAAAAAGCAGAAGTCAAACGAAGTAGGTAATGACAAGCACAGTGACTTGGAAGCAGCTTTACCAAATGAGGGAGCACAATTTGCTGTTCTTCCTGCTCTTCGACCCATGGAAGATATTAAATCAGCTGAAGCAGAGAATGAGCAGAGCAAGTTTGCTTACTCTCTGGCTCTTGCAACTGCTGCTGCAGCAGAGGCTGCTGTTGCTGCAGCTCAGGCTGCAGCAGAGGTTGTTCGTCTTACTAGCATGTCCCGTTACCGTGGAAAGTCAAAGGAAGACATGGCAGCTATCAAAATTCAGACAGCATTTCGAGGATATTTGGCAAGAAGAGCATTGCGTGGCTTGAAAGGTTTGGTGAGGTTGAAGAGATTGGTACAAGGGAAATCTGTTAAACGACAAGCAGCTTCTACATTACGATGCATGCAGACCCTGACAAGATTGCAGTCTCAGGTTCATGAGAGGAGGGCTAGAATGTCAGAGGAGAACCAGGCTCTTCAGCGGCAGCTGCAGCAGAAACATGAAAAAGAACTTGAGAAGTTGCAAGCTGCTCAGATTGTTGAAGAATGGGATGATACAGCGCAATCAAAGGAGCAAATTGAAGCAAAACAGTCTAAAAGGCAAGAAGCTGCAGTTCGAAGAGAGAGAGCTCTGGCCTATGCATTTTCACATCAGCGAAAATGGAGGAACTCTTTGAAACCTGCAAATCCTACCACATTCATGGATCCAAACAATCCCCATTGGGGTTGGAGCTGGCTAGATCGATGGGTAGTGGCACAGCCTGCGGATGGCCGAAGCACTATGGATCACAGCGAGCGTGAATCTGCAAAAAGCATGGCGAGCCAACCCATGTCTGTTGGAGAAATTACTAAACTGTATGCTTCCCGCACTCATATACATCACGATAACAAGCCTGCTCCAGCTGGCCAAAAATCAAGCCGGCCTCCAAGTCACCGATCTTCTTCAACCCCACTTTCAAAGGCCCCATCTATCTTATCGACTTCTGGCAGAGTAAGGGCACCAAGCCCAAAGACAAGTTCTTGGGGCCGTCATGATGACTCAAGGAGCGCAATTAGTGCTCAGTCACAACGGTACCGTAGGCATACTATTTCGGGATCATCGTTCGGAGATGATGAGAGCTTTGCAAGCTCATCTGCCTTCTCAACTTGCACAGTTCCTACCAAGTCAGCTAAGGCCAAATCCAGAATTGAAAGCCCATCACTTGTTGCAGATAAAAAAGGGACACCAGAGAAAGGATCCAATGCAAAGAAGCGTCTATCCTTCTCGGGTTCCCTGGCAAGTTCGAGAAATCATTCAGGTCCTCTTAAGGTGGATCTTTTTGCTTCCAATAAGGATGCTGCTTCAGTCACTAAGACGAAAGTTGCCAATGGTGGCAGGTAG 1467 0.4724 MGRKGNWFSSVRKVLSPHSKKDQDKKQKSNEVGNDKHSDLEAALPNEGAQFAVLPALRPMEDIKSAEAENEQSKFAYSLALATAAAAEAAVAAAQAAAEVVRLTSMSRYRGKSKEDMAAIKIQTAFRGYLARRALRGLKGLVRLKRLVQGKSVKRQAASTLRCMQTLTRLQSQVHERRARMSEENQALQRQLQQKHEKELEKLQAAQIVEEWDDTAQSKEQIEAKQSKRQEAAVRRERALAYAFSHQRKWRNSLKPANPTTFMDPNNPHWGWSWLDRWVVAQPADGRSTMDHSERESAKSMASQPMSVGEITKLYASRTHIHHDNKPAPAGQKSSRPPSHRSSSTPLSKAPSILSTSGRVRAPSPKTSSWGRHDDSRSAISAQSQRYRRHTISGSSFGDDESFASSSAFSTCTVPTKSAKAKSRIESPSLVADKKGTPEKGSNAKKRLSFSGSLASSRNHSGPLKVDLFASNKDAASVTKTKVANGGR 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0428 488 MobiDBLite consensus disorder prediction 285 308 - -
Prci1g0428 488 PANTHER IQ-DOMAIN 5-RELATED 1 465 - -
Prci1g0428 488 MobiDBLite consensus disorder prediction 444 460 - -
Prci1g0428 488 Coils Coil 171 201 - -
Prci1g0428 488 MobiDBLite consensus disorder prediction 15 42 - -
Prci1g0428 488 MobiDBLite consensus disorder prediction 1 46 - -
Prci1g0428 488 Pfam IQ calmodulin-binding motif 117 136 IPR000048 GO:0005515
Prci1g0428 488 MobiDBLite consensus disorder prediction 374 423 - -
Prci1g0428 488 Gene3D iswi atpase 112 139 - -
Prci1g0428 488 ProSiteProfiles IQ motif profile. 115 143 IPR000048 GO:0005515
Prci1g0428 488 SMART iq_5 114 136 IPR000048 GO:0005515
Prci1g0428 488 MobiDBLite consensus disorder prediction 322 471 - -
Prci1g0428 488 MobiDBLite consensus disorder prediction 335 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0428 Prci-Chr1 4155024 4159693 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0428 1 467 IQD Protein Family AT5G03040 44.000 1.48e-106 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0428 - - tcc:18586349 490.345