Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g0426 ATGCATTTGTTTGTTGTCTTTGTAACTTTCTCTTGTTCTTGTCAGTTTCAGTTTTTAGTAAGTGACTACGACATGGGGAGGAAAGGGAATTGGTTTTCTTCAGTGAGGAAAGTTCTCAGTCCTCATTCCAAGAAAGATCAGGACAAAAAGCAGAAGTCAAACGAAGTAGGTAATGACAAGCACAGTGACTTGGAAGCAGCTTTACCAAATGAGGGAGCACAATTTGCTGTTCTTCCTGCTCTTCGACCCATGGAAGATATTAAATCAGCTGAAGCAGAGAATGAGCAGAGCAAGTTTGCTTACTCTCTGGCTCTTGCAACTGCTGCTGCAGCAGAGGCTGCTGTTGCTGCAGCTCAGGCTGCAGCAGAGGTTGTTCGTCTTACTAGCATGTCCCGTTACCGTGGAAAGTCAAAGGAAGACATGGCAGCTATCAAAATTCAGACAGCATTTCGAGGATATTTGGCAAGAAGAGCATTGCGTGGCTTGAAAGGTTTGGTGAGGTTGAAGAGATTGGTACAAGGGAAATCTGTTAAACGACAAGCAGCTTCTACATTACGATGCATGCAGACCCTGACAAGATTGCAGTCTCAGGTTCATGAGAGGAGGGCTAGAATGTCAGAGGAGAACCAGGCTCTTCAGCGGCAGCTGCAGCAGAAACATGAAAAAGAACTTGAGAAGTTGCAAGCTGCTCAGATTGTTGAAGAATGGGATGATACAGCGCAATCAAAGGAGCAAATTGAAGCAAAACAGTCTAAAAGGCAAGAAGCTGCAGTTCGAAGAGAGAGAGCTCTGGCCTATGCATTTTCACATCAGCGAAAATGGAGGAACTCTTTGAAACCTGCAAATCCTACCACATTCATGGATCCAAACAATCCCCATTGGGGTTGGAGCTGGCTAGATCGATGGGTAGTGGCACAGCCTGCGGATGGCCGAAGCACTATGGATCACAGCGAGCGTGAATCTGCAAAAAGCATGGCGAGCCAACCCATGTCTGTTGGAGAAATTACTAAACTGTATGCTTCCCGCACTCATATACATCACGATAACAAGCCTGCTCCAGCTGGCCAAAAATCAAGCCGGCCTCCAAGTCACCGATCTTCTTCAACCCCACTTTCAAAGGCCCCATCTATCTTATCGACTTCTGGCAGAGTAAGGGCACCAAGCCCAAAGACAAGTTCTTGGGGCCGTCATGATGACTCAAGGAGCGCAATTAGTGCTCAGTCACAACGGTACCGTAGGCATACTATTTCGGGATCATCGTTCGGAGATGATGAGAGCTTTGCAAGCTCATCTGCCTTCTCAACTTGCACAGTTCCTACCAAGTCAGCTAAGGCCAAATCCAGAATTGAAAGCCCATCACTTGTTGCAGATAAAAAAGGGACACCAGAGAAAGGATCCAATGCAAAGAAGCGTCTATCCTTCTCGGGTTCCCTGGCAAGTTCGAGAAATCATTCAGGTCCTCTTAAGGTGGATCTTTTTGCTTCCAATAAGGATGCTGCTTCAGTCACTAAGACGAAAGTTGCCAATGGTGGCAGGTAG 1539 0.4659 MHLFVVFVTFSCSCQFQFLVSDYDMGRKGNWFSSVRKVLSPHSKKDQDKKQKSNEVGNDKHSDLEAALPNEGAQFAVLPALRPMEDIKSAEAENEQSKFAYSLALATAAAAEAAVAAAQAAAEVVRLTSMSRYRGKSKEDMAAIKIQTAFRGYLARRALRGLKGLVRLKRLVQGKSVKRQAASTLRCMQTLTRLQSQVHERRARMSEENQALQRQLQQKHEKELEKLQAAQIVEEWDDTAQSKEQIEAKQSKRQEAAVRRERALAYAFSHQRKWRNSLKPANPTTFMDPNNPHWGWSWLDRWVVAQPADGRSTMDHSERESAKSMASQPMSVGEITKLYASRTHIHHDNKPAPAGQKSSRPPSHRSSSTPLSKAPSILSTSGRVRAPSPKTSSWGRHDDSRSAISAQSQRYRRHTISGSSFGDDESFASSSAFSTCTVPTKSAKAKSRIESPSLVADKKGTPEKGSNAKKRLSFSGSLASSRNHSGPLKVDLFASNKDAASVTKTKVANGGR 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g0426 512 ProSiteProfiles IQ motif profile. 139 167 IPR000048 GO:0005515
Prci1g0426 512 PANTHER IQ-DOMAIN 5-RELATED 25 489 - -
Prci1g0426 512 Gene3D iswi atpase 136 163 - -
Prci1g0426 512 MobiDBLite consensus disorder prediction 398 447 - -
Prci1g0426 512 SMART iq_5 138 160 IPR000048 GO:0005515
Prci1g0426 512 MobiDBLite consensus disorder prediction 468 484 - -
Prci1g0426 512 Pfam IQ calmodulin-binding motif 141 160 IPR000048 GO:0005515
Prci1g0426 512 MobiDBLite consensus disorder prediction 42 63 - -
Prci1g0426 512 Coils Coil 195 225 - -
Prci1g0426 512 MobiDBLite consensus disorder prediction 359 388 - -
Prci1g0426 512 MobiDBLite consensus disorder prediction 309 332 - -
Prci1g0426 512 MobiDBLite consensus disorder prediction 346 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g0426 Prci-Chr1 4155021 4159693 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g0426 25 491 IQD Protein Family AT5G03040 44.000 4.03e-106 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g0426 - - tcc:18586349 490.345